| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1697 |
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| Symbol | |
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| ID | 5105343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1635708 |
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| End bp | 1637162 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507591 |
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| Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
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| Protein accession | YP_001191776 |
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| Protein GI | 146304460 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.373117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCTTCA AGGATCTTCG AGACTATCTA GAGAATATGC GTTCCAAGGG CAAACTTATC
GAAGTGGAGC ACGAGGTTGA TGTGAACCTG GAAATAGCCG AGCTAGGGAG AAGGGCCACA
TATTCTCATC TCCCACCGCT ACTCTTCACC AGGGTTAAGG GTTATCCTGG CTGGAAAGTG
CTCACTAACG TTTACTATTC AATGGAGGGA ATCTATGAGT TGTTTGGGAC CAAGAACCTT
GAGGGGATAG CGGACAACTT TCTAGCGAGT TTCGGGGAGG TACCAATCAC AATTCTCGAT
AAAGCGAAAT CTCTCCCATC ACTTCTGAAG CTGGGAAAGT ACATGCCGAA GGGTAAGAAG
GCCTTGTTCA AAGAGGACAA GAGCCTGAAC CTGGAGGCAT TGCCTGCAAC AAAGACTTGG
CCAAAGGATG CAGGCCGATA CATGACGTTT TCTATTGTAA TAACGAAGGA TCCAGAAAAA
AACACAAATA ACTTAAGTAT ATATAGAGTA CAAATATTGA ATGAAAGGGA AGCGTTAGTG
CACTGGCAAG CGTTCAAGAG AGGATCCCTG GCAGCCTCCA AGTACAGGGA TCTGGGCTTG
TCTAAGGTAC CGGTGGCGAT AGTCAATGGA GTGGACCCTA TCATAACTTT CACTGCTGCG
TCTCCTGTGC CTCCTGGACT GGACAAGTAT CTGTTTGCCG GGATACTGAG GGATGAGGGC
GTGGACGTGG TGGAGTTGGA CAACGGAATA CTGGTTCCAG CCCACGCCGA GTCAGTACTT
GAGGGTTACG TAGATTTGAA CGACATGAGG CCTGAAGGAC CCTTTGGGGA TCACCTAGGA
TACTACACTC CTCAGGATTA CTACCCAGTG TTTAAGCTCG AGAAAGCCTA CGTGAGGGAG
AACCCCATCT ACCATGTAAC TTCCGTGGGA AAACCACCGC TCGAGGACAC TTGGATAGGG
AAGGGTGTTG AGAGGATATT CCTGCCTTTC CTGAAGATGA TAATTCCAGA CCTAGTTGAC
ATGAACCTGC CAGAGTATGG TCTTTTCACT AGTATAGGAA TATTTTCAAT ACGGAAAAGG
TATCCAGGAC AGGCCAGGAG GGCCATGATG TCAATTTGGG GTACTGGGCA ACTTAGCTTC
CTGAAGCTGG TGATCATTGT TGATAGCGAC GTTAACATTC ATGATATGAA CCAGGTTCTT
TATGCCATTG CCAGTACGGT GGATCCTCAA CGCGACGTTA TGATAGTTAC CAATGCCCTA
AATGACAGTT TAGATCATAC AGTTCCTAAT CCCCCTCTTG GGAGCAAAAT GGGGATAGAC
GCAACTAGAA AGTTCAAGGA GGAGTTAGGG AAGGATTGGC CAGAGCCCGT AGAAAGTGAT
CCAGACGTGG TTAAGAGGAT ATCCGAGGTC TGGGAGAAGA TAGCCTCTAA ATGGCCAAGT
CCTCCCTCAA GGTAG
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| Protein sequence | MGFKDLRDYL ENMRSKGKLI EVEHEVDVNL EIAELGRRAT YSHLPPLLFT RVKGYPGWKV
LTNVYYSMEG IYELFGTKNL EGIADNFLAS FGEVPITILD KAKSLPSLLK LGKYMPKGKK
ALFKEDKSLN LEALPATKTW PKDAGRYMTF SIVITKDPEK NTNNLSIYRV QILNEREALV
HWQAFKRGSL AASKYRDLGL SKVPVAIVNG VDPIITFTAA SPVPPGLDKY LFAGILRDEG
VDVVELDNGI LVPAHAESVL EGYVDLNDMR PEGPFGDHLG YYTPQDYYPV FKLEKAYVRE
NPIYHVTSVG KPPLEDTWIG KGVERIFLPF LKMIIPDLVD MNLPEYGLFT SIGIFSIRKR
YPGQARRAMM SIWGTGQLSF LKLVIIVDSD VNIHDMNQVL YAIASTVDPQ RDVMIVTNAL
NDSLDHTVPN PPLGSKMGID ATRKFKEELG KDWPEPVESD PDVVKRISEV WEKIASKWPS
PPSR
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