| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1685 |
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| Symbol | trpC |
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| ID | 5105331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1624330 |
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| End bp | 1625082 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507579 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001191764 |
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| Protein GI | 146304448 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.159562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0633733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGAGAT ATCTTGAAGG ATGGATCAAG GATGTGGTTG AAAATGCTAA GAGGAGGCCT
TACGTTTCCA GGAGCAGAGA GAAACCGGTT CTACAGATAA TTCCAAGAAT AAGGGCAGTA
AAGGGCGCGG GGCTAAATCC TGTCATTGCT GAGTATAAGA GGAAATCGCC CTCAGGATTT
TCCGAGGACA GGGATCCAAT ATCCTATGCG AAGTCAATGG AGCAAGGAGG TGCCGTTGCG
ATCAGCGTGA TTACCGAGAA CACCGTGTTC GGAGGCTCTT ACGAGTACCT GGAGAGGATA
GCGAGGAACG TCAAGATTCC GTTACTCATG AAGGATTTCG TAGTCAGTGA GAACCAAGTG
GATACTGCAT ATGACCTTGG AGCCGATTTT GTTCTACTAA TTGTCAGAAT TCTCACGGAA
AGGGAACTCT CGGGCCTTCT AGAATACGTG AGATCTTACG GGATGGAGGC CTTAGTCGAG
GTTCATGATA GGGAGGACCT CGATATAGCT TTAAGGTCTG GCGCAAGCCT CATAGGTGTT
AACTCAAGGG ATCTCTTCTC TCTCACAATT CAGAAGGAGA TGGCCATGAA GCTACTGGAA
CAGATACCTT CCACAGTTAC CAAGGTGGCC GAGAGCGGGA TAGAGTCCGC CGAAGAGATC
AGGCTCTTGA GGGAGAAGGG AGCGGACGCC TTTCTCATAG GATCCAGTCT AATGCGCAAT
CCAGATAAGA TTAAAGAGTT TGTTCAAGGG TAA
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| Protein sequence | MPRYLEGWIK DVVENAKRRP YVSRSREKPV LQIIPRIRAV KGAGLNPVIA EYKRKSPSGF
SEDRDPISYA KSMEQGGAVA ISVITENTVF GGSYEYLERI ARNVKIPLLM KDFVVSENQV
DTAYDLGADF VLLIVRILTE RELSGLLEYV RSYGMEALVE VHDREDLDIA LRSGASLIGV
NSRDLFSLTI QKEMAMKLLE QIPSTVTKVA ESGIESAEEI RLLREKGADA FLIGSSLMRN
PDKIKEFVQG
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