Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1658 |
Symbol | |
ID | 5104863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1601590 |
End bp | 1602336 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507552 |
Product | FeS assembly ATPase SufC |
Protein accession | YP_001191737 |
Protein GI | 146304421 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACAC TTAAAGTTGA AAACCTTCAC GTTGAGGTTG AGGGTAAGGA AGTCCTTAAG GGAGTTACGT TCGAGGTCAA GAGCGGAGAG ATACATGCTT TGATGGGTCC TAACGGAAGC GGTAAAACCA CCCTTTCCTT GGCTCTCATG GGACACCCCA AGTATAAGAT AACCAAGGGT TCAATCATAC TCGACGGTGA GGACATAACA AACCTAGAGA CAGACGAGAA GGTCAAGAGG GGGCTATTTC TAGCCTTTCA GAACCCCATA GAGATAAGCG GGGTCAAGTT GTCCACCCTT CTCGTGGCCG AGTATAACAG GATATCAGGC TCCAATAAGT CCGTGTCAGA GATAGTTGGT GATGTTAGGA ACATTGCCAA GTCTGTTGGA CTTAACGAGA CCCTTCTGAA CAGGGGAGTC TTTGACGGCT TTAGCGGTGG TGAGAAGAAA AGGACCGAGA TTCTTCAGAT GTTGCTCATG AAACCCAAGT TTGCTATCTT GGACGAGCCC GACTCCGGAG TTGATGTTGA CGGATTGAGG ATAATTTCAG AAGGCATAAA GAAACTCAGG GCCGAAAACA ACACAGGCTA CGTGATAATC ACGCATTACA GGAGGATCCT AGATTACGTC AATGCCGATA AGGTCCATGT TCTATATAGG GGAACAATAA TAGCCAGCGG TGGAATGGAA CTGGCAAAGC TCATTGACGA GAAGGGCTAT GAGGGAGTAA TTAAATCTCG CAACTGA
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Protein sequence | MSTLKVENLH VEVEGKEVLK GVTFEVKSGE IHALMGPNGS GKTTLSLALM GHPKYKITKG SIILDGEDIT NLETDEKVKR GLFLAFQNPI EISGVKLSTL LVAEYNRISG SNKSVSEIVG DVRNIAKSVG LNETLLNRGV FDGFSGGEKK RTEILQMLLM KPKFAILDEP DSGVDVDGLR IISEGIKKLR AENNTGYVII THYRRILDYV NADKVHVLYR GTIIASGGME LAKLIDEKGY EGVIKSRN
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