Gene Msed_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1658 
Symbol 
ID5104863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1601590 
End bp1602336 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID640507552 
ProductFeS assembly ATPase SufC 
Protein accessionYP_001191737 
Protein GI146304421 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAC TTAAAGTTGA AAACCTTCAC GTTGAGGTTG AGGGTAAGGA AGTCCTTAAG 
GGAGTTACGT TCGAGGTCAA GAGCGGAGAG ATACATGCTT TGATGGGTCC TAACGGAAGC
GGTAAAACCA CCCTTTCCTT GGCTCTCATG GGACACCCCA AGTATAAGAT AACCAAGGGT
TCAATCATAC TCGACGGTGA GGACATAACA AACCTAGAGA CAGACGAGAA GGTCAAGAGG
GGGCTATTTC TAGCCTTTCA GAACCCCATA GAGATAAGCG GGGTCAAGTT GTCCACCCTT
CTCGTGGCCG AGTATAACAG GATATCAGGC TCCAATAAGT CCGTGTCAGA GATAGTTGGT
GATGTTAGGA ACATTGCCAA GTCTGTTGGA CTTAACGAGA CCCTTCTGAA CAGGGGAGTC
TTTGACGGCT TTAGCGGTGG TGAGAAGAAA AGGACCGAGA TTCTTCAGAT GTTGCTCATG
AAACCCAAGT TTGCTATCTT GGACGAGCCC GACTCCGGAG TTGATGTTGA CGGATTGAGG
ATAATTTCAG AAGGCATAAA GAAACTCAGG GCCGAAAACA ACACAGGCTA CGTGATAATC
ACGCATTACA GGAGGATCCT AGATTACGTC AATGCCGATA AGGTCCATGT TCTATATAGG
GGAACAATAA TAGCCAGCGG TGGAATGGAA CTGGCAAAGC TCATTGACGA GAAGGGCTAT
GAGGGAGTAA TTAAATCTCG CAACTGA
 
Protein sequence
MSTLKVENLH VEVEGKEVLK GVTFEVKSGE IHALMGPNGS GKTTLSLALM GHPKYKITKG 
SIILDGEDIT NLETDEKVKR GLFLAFQNPI EISGVKLSTL LVAEYNRISG SNKSVSEIVG
DVRNIAKSVG LNETLLNRGV FDGFSGGEKK RTEILQMLLM KPKFAILDEP DSGVDVDGLR
IISEGIKKLR AENNTGYVII THYRRILDYV NADKVHVLYR GTIIASGGME LAKLIDEKGY
EGVIKSRN