| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1651 |
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| Symbol | |
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| ID | 5104856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1593230 |
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| End bp | 1593637 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507542 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001191730 |
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| Protein GI | 146304414 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.825176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGATCTC CAACTTACAC CGTAAGTATG TGGTTTAGGA AGATCTTGGT TCCGGTGGAC
GGCTCGGAGA ACAGCATGAG GGCGCTGGAA CTAGCTGTTG ACTTCAGCCT GAGATACGGG
TCCAGGGTTA CAGTGTTCTA CGCATGTGAT AGGTGCTCAG ATAAGGAGAC TATACAGAAG
CTGGTAAGGG AGAAAATTGA GGATAGAATA GACTACGACT TTCGTGTGGC AGACGTGCCA
AGGGATAGTA GCACGTCCAA CGAGATCATC AAGGTTCTAT CGGAAGGCGT GTTTGACGCC
GTGATAATGG GAGCCAGGGG GAACACGACG AACAGTGACA TCAACACAGG TTCAAATGCC
CTCTCTGTTG TCGTTAATGC CCCTGTAACG GTTATAGTTG TAAGGTAA
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| Protein sequence | MGSPTYTVSM WFRKILVPVD GSENSMRALE LAVDFSLRYG SRVTVFYACD RCSDKETIQK
LVREKIEDRI DYDFRVADVP RDSSTSNEII KVLSEGVFDA VIMGARGNTT NSDINTGSNA
LSVVVNAPVT VIVVR
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