Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1636 |
Symbol | rplP0 |
ID | 5104841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1576477 |
End bp | 1577466 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640507526 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001191715 |
Protein GI | 146304399 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.231834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAA CAGAGGAAAG GAAAATCCCA AAATGGAAGA TTGACGAAGT AGCTGAGCTA GAGGAAAAGA TCAAGAACTC TAGCACCGTC ATGATTGCTG ACATCCAAGG ATTCCCCACA GACAAGCTAC ACGAGATTAG GAAAAAGTTA AGGGGAAAGG CAGAGATCAA AGTGACCAAG AACACCCTCT TCCTAATTGC TGCGAAGAGG GCAGGGATTG ACGTCAGCAA AATCGAGAAC TATATCACGG GGAGTAACGC CTTCATTTTC TCCAATGACA ACCCCTTTGC GATCTCAATC TTCCTATCCA AGTTTAAGCT AAAGAGGTAT CCAATGCCCG GAGACAAGGC GGACGAGGAG GTCGTGATTC CCGCAGGAGA CACTGGAATG ACTGCAGGAC CAATACTCAG CACCTTTGGA AAGCTCAAGG TTCAGACCAA GGTACAGGAT GGTAAGGTTC ATGTAGTGAA GGACACCGTG ATCGCGAAGC CTGGGGATCC AATACCTCCT GAGGCTGCCC CAATACTTCA GAAGTTAGGA ATAATGCCAG TCTACGTCAA GCTGAAACTT AAGGCTGCAT ATCACGAAGG GTTAGTTATA CCAGTAAGTG AGCTGGAGAT CAACCTAGAT CAATATTCCT CCATGGTCGC AGAGGCCTCA AGAAATTCCC TAGCTCTAGG CGTCGAGATA GCCTACCCAG TGCCAGAGGT CCTCAAGTTG ACCATAGGGA AGGCCCACAT GAGAGCATTA GCCCTTGCTG GAGAGTCGGG CTTCCTAACT CCAGACACTG CCAACTCAGT CCTAAGCAGG GCAGTAGCCA AGGCCTACGC ATTGGTCTCG GCCTTGGGTG GGAAGGTAGA TCTAGGGGTA GAGGTTCCAA AACAACAGAC GGTCCAGCAA GAGAAGAAGG AGGAGAAGAA GGAAGAGGAG GAGAAGAAGG GTCCAAGCGA CGAGGACGTA GGAGGAGGAC TCTCCTCCCT GTTCGGATAA
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Protein sequence | MSITEERKIP KWKIDEVAEL EEKIKNSSTV MIADIQGFPT DKLHEIRKKL RGKAEIKVTK NTLFLIAAKR AGIDVSKIEN YITGSNAFIF SNDNPFAISI FLSKFKLKRY PMPGDKADEE VVIPAGDTGM TAGPILSTFG KLKVQTKVQD GKVHVVKDTV IAKPGDPIPP EAAPILQKLG IMPVYVKLKL KAAYHEGLVI PVSELEINLD QYSSMVAEAS RNSLALGVEI AYPVPEVLKL TIGKAHMRAL ALAGESGFLT PDTANSVLSR AVAKAYALVS ALGGKVDLGV EVPKQQTVQQ EKKEEKKEEE EKKGPSDEDV GGGLSSLFG
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