Gene Msed_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1634 
Symbolrpl11p 
ID5104839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1575304 
End bp1575810 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content49% 
IMG OID640507524 
Product50S ribosomal protein L11P 
Protein accessionYP_001191713 
Protein GI146304397 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0552627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA AATCCATAAA AGTAGTGGTA GAGGGAGGGA ACGTAAAACC CGGTCCACCC 
CTCGCCCCAA CCCTATCCCA ACTTGGGTTA AACGTTGGGG AAGTGGTCAA GAAGATAAAT
GAGGCCACGT CTCAGTTCAA GGGGATGACA GTCCCCGTCA CACTGGACGT GGACACGGAC
ACTAAGAAGT ATGAGGTGTC CGTGGGAGTT CCGACCACTA CTTCTCTCCT TGTGAAGAAG
GCAGGAGCAA GCGGTCCATC TGGGGATCCA GAGCACAAGA AAATAGGTAA CATCTCCATG
GATGATGTGA TTGAGGTCGC TATCTCGAAG AAGCCATCCC TAACAGCCAA GGAACTGAAG
GGAGCTGTGA AGAGTATCCT GGGAACAGCT AAATCAATTG GCCTAACAGT GGATAACAAG
GATCCCAAGC TAGTGGTGAG AGAAGTAGAA GAAGGTAAAT ATGACGATAA GATAAAGGAA
ATGGAGGAAA AGTGGTCTTC AGGGTGA
 
Protein sequence
MAKKSIKVVV EGGNVKPGPP LAPTLSQLGL NVGEVVKKIN EATSQFKGMT VPVTLDVDTD 
TKKYEVSVGV PTTTSLLVKK AGASGPSGDP EHKKIGNISM DDVIEVAISK KPSLTAKELK
GAVKSILGTA KSIGLTVDNK DPKLVVREVE EGKYDDKIKE MEEKWSSG