| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1598 |
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| Symbol | |
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| ID | 5104165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1545635 |
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| End bp | 1546360 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507488 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001191677 |
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| Protein GI | 146304361 |
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| COG category | [K] Transcription |
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| COG ID | [COG1709] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.141613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACTG AATACGTTAT AGAGAGCATT GCCAAGAGAA TAGCCGGGGA CATAGTGTGG
AGCGAGAACC CAGGTCTCGC AATGAGGAAG TGGAGGGAGA CCTTTGGGAT TTCCCAGTCA
GAGCTGGCTC GAATACTTGG GATGTCCCAA TCGGTCATAG CTGATTATGA AAGGAATAGG
AGGCAACCTG GAAGCTACGT AGTCAAGAAG TTCGTGGAAG GGTTGATAGA GGCCGACTCC
AAAAGGGGTT ACAAGGTGAT AAATGAGCTA GGGAAACTCT TCTCCCTGAA CTTTCCCTTC
ATACTAGATA TGGCCGACTT CGTGTCTCCA ATAACGCTCC AGGACGTCGT GATGGCCGTG
GACGGGATAC CCGTGATGGC AGATCTGAGC AACATACAGG TCTACGGCTA TGTGATCACA
GACAGTATTA GGGCTATCAC GGCATTAAGC GGAATGGAGT TCTACCAGTT CCTTTCCATA
GTGTTCAACA GAATCCTCGT ATTCACAAAG GTGTCAAGCG GAAGGTCGCC CATGATAGCC
CTTAAGATTG CCCCCATAAG ACCTAAACTC GTAATCCTGC ATAGGCCGGT TAAGATGGAT
CCCCTTTCCA TATACATTGC CAACAAGGAG GGCATAAACG TAATAGTTTC CACCAAGAGA
ACTGAAGATG AACTTCTTAA CGGGCTTAAG AGCCTTGCCC TTCGGTCAGA GATAAAATTG
CCTTAG
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| Protein sequence | MATEYVIESI AKRIAGDIVW SENPGLAMRK WRETFGISQS ELARILGMSQ SVIADYERNR
RQPGSYVVKK FVEGLIEADS KRGYKVINEL GKLFSLNFPF ILDMADFVSP ITLQDVVMAV
DGIPVMADLS NIQVYGYVIT DSIRAITALS GMEFYQFLSI VFNRILVFTK VSSGRSPMIA
LKIAPIRPKL VILHRPVKMD PLSIYIANKE GINVIVSTKR TEDELLNGLK SLALRSEIKL
P
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