Gene Msed_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1573 
Symbol 
ID5104018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1523245 
End bp1523529 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content39% 
IMG OID640507459 
Producthypothetical protein 
Protein accessionYP_001191652 
Protein GI146304336 
COG category[K] Transcription 
COG ID[COG3432] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0116565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAC GAAGGACTTC TATAGAAATA ATTGCCGATA TCCTCGAGGT TGTTAGTAGT 
GGTAGCGGTA GTAAGTCCTC AATCATGAAG AATGCAAATC TGAGCGAAGG GCTAACAGAG
AAATACCTAT CCATACTAAA GGATAAGGGA CTGATTAAAC AGAAAGATAG TTCATTTGTG
CTTACCGAGA AGGGACAGCA GATCCTTTCT AACTTCAGGG AAATCAGAAA ACTTGAGCTG
AGATTGGATG AACTCTTAAA TTCAACGCTG AACGAATTAT CTTAG
 
Protein sequence
MRSRRTSIEI IADILEVVSS GSGSKSSIMK NANLSEGLTE KYLSILKDKG LIKQKDSSFV 
LTEKGQQILS NFREIRKLEL RLDELLNSTL NELS