Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1573 |
Symbol | |
ID | 5104018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1523245 |
End bp | 1523529 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640507459 |
Product | hypothetical protein |
Protein accession | YP_001191652 |
Protein GI | 146304336 |
COG category | [K] Transcription |
COG ID | [COG3432] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0116565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCAC GAAGGACTTC TATAGAAATA ATTGCCGATA TCCTCGAGGT TGTTAGTAGT GGTAGCGGTA GTAAGTCCTC AATCATGAAG AATGCAAATC TGAGCGAAGG GCTAACAGAG AAATACCTAT CCATACTAAA GGATAAGGGA CTGATTAAAC AGAAAGATAG TTCATTTGTG CTTACCGAGA AGGGACAGCA GATCCTTTCT AACTTCAGGG AAATCAGAAA ACTTGAGCTG AGATTGGATG AACTCTTAAA TTCAACGCTG AACGAATTAT CTTAG
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Protein sequence | MRSRRTSIEI IADILEVVSS GSGSKSSIMK NANLSEGLTE KYLSILKDKG LIKQKDSSFV LTEKGQQILS NFREIRKLEL RLDELLNSTL NELS
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