| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1566 |
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| Symbol | |
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| ID | 5104011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1519996 |
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| End bp | 1520382 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640507452 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001191645 |
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| Protein GI | 146304329 |
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| COG category | [K] Transcription |
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| COG ID | [COG3355] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.449969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0696439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGTCC AAAAATTAAA AGCTAGACTC CCTTCCGGAA GGGAAGTAGG ATTGGTGGAG
GCACTAAGCT TCTGCTACGA TATATCTGAC ACGGATTTTC AGATACTTAA GGCACTGATA
AATATGGGAC CAAAGACCGA GGATGATTTA GCCTCAGTGT TGAAGCTCAG CAAGGCGTCC
ATAAATAGGT CGGTGAATAA ATTAATCTCC ATTGGATTCG TGGAGAGGGT TAAGGATCAA
GGATCTAAGG GAGGCAGGCC TAGGTACATA TATAAAGCAG TTGATGCGGA AGCTCTTACT
GATAAGATAG TAAAGGACTT CGAGTACTGC GCTCAGCTCT TTAGTGGTCT AACTCCTGCA
GAGCTCAAGA GCTTTCCGAA GCCTTAG
|
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| Protein sequence | MEVQKLKARL PSGREVGLVE ALSFCYDISD TDFQILKALI NMGPKTEDDL ASVLKLSKAS
INRSVNKLIS IGFVERVKDQ GSKGGRPRYI YKAVDAEALT DKIVKDFEYC AQLFSGLTPA
ELKSFPKP
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