| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1540 |
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| Symbol | |
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| ID | 5104067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1500772 |
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| End bp | 1501689 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507426 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_001191619 |
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| Protein GI | 146304303 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.494574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0390081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTACTAT CCACTTTGAT AGTAGACCTC GTAATAGTTC TAGCTCTAAT GTCCCTATCA
GCTGAACTCC TAGCAAAGGG TGTGGAGGAA CTAGAAGAAG TAATGGGTCA AGGCCTTGCA
GGTGGAGTGG TACTGGGAAC CCTTACGGCG CTTCCTGAAA CCCTGATTGT CATAACGGCG
GTATTGGAAA ATAAGGGTGA AGTGGCCCTT GGATCAGCCG TTGGCGGTAA CGTAGTTCTA
TTTACGTTAG GCGTTGGCCT GGTTGCCATG CTCTATCAAT GGAAGTGGGG TAGGCCATTA
ACCATGAAGG GCGATTATGG ACACGAACTC ACGATCATGG GCATTACCTC CGCTGTCTTG
GTTATACCCC TACTACTGGG TAACCTAAAT CCCCTGATTT CAGTGGCACT TTTTTCCATT
TATGCCTACT ATGTCATTTC AAGGATAAGG AAGGGATCAA GGGGAAAGAT CAACATCAAG
AGCATGATTC AGGTAATAGT TGGAGGATCC ATTGTGGTGG TACTCTCACC CTATTTCGTT
AACATTATCT CAGAGCTTGC TCTCTACAGC GGGATCTCTC AAGCCTGGAT ATCCCTCGCA
CTCACCCCAA TAGTGGCTGA GCTGGAAGAG GGAATTTCCT CCATAAGGTT GGCTCTAAAG
TATCCTGCTG GCGGTTCCAC AGCCGTGGTA AGTTACTTTG GTAGCAAAAT ACAGAACGCT
ACTCTTCTCC TGGGACTAGT TGGATTAGAT TTTGTTAACG TGAGGGGACC GTTTCTACTG
TTAGCCCTGA TCTCAAACCT GATCGGAATA GCAATAGTGA AGGACGGGAA ATTGACCTTC
ACCGAGGGGT TATTGTTGTC GGTTATATAT TTTGCAATGT TGTACGTAGC TTTCATCTTT
CAATTTTCCT CGATTTAG
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| Protein sequence | MLLSTLIVDL VIVLALMSLS AELLAKGVEE LEEVMGQGLA GGVVLGTLTA LPETLIVITA
VLENKGEVAL GSAVGGNVVL FTLGVGLVAM LYQWKWGRPL TMKGDYGHEL TIMGITSAVL
VIPLLLGNLN PLISVALFSI YAYYVISRIR KGSRGKINIK SMIQVIVGGS IVVVLSPYFV
NIISELALYS GISQAWISLA LTPIVAELEE GISSIRLALK YPAGGSTAVV SYFGSKIQNA
TLLLGLVGLD FVNVRGPFLL LALISNLIGI AIVKDGKLTF TEGLLLSVIY FAMLYVAFIF
QFSSI
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