| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1487 |
|---|
| Symbol | |
|---|
| ID | 5104734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1453849 |
|---|
| End bp | 1454805 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640507375 |
|---|
| Product | PP-loop domain-containing protein |
|---|
| Protein accession | YP_001191568 |
|---|
| Protein GI | 146304252 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR00269] conserved hypothetical protein TIGR00269 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACTGCA AGAAGTGCGG TTCCAAGGCC ATAATTAAGA TAACCTCAGC TAATCTTACC
CTCTGTTCCT CCCACTTCAC GGAGTGGTTA GAGGGCAGGG TTGAAAGGAC CATTAGGGAT
TACGGCATGA TTCGTGGCGG GGAGAGAGTA GCAGTGGCAG TCTCAGGGGG TAAAGATAGT
ACAACGTTGC TCCATGTCCT TGCGAAGCTA TCTGGGAAGA TGGGTTTCGA GGTTGTGGGG
ATAAACATAG ACCTCGGGAT AGACAGGGGC ACCAAATACT CTTCACTGAG CACAGAGTTT
GCAGTCAAGA ACTTTGAGAA ACTAGGGGTC GAGTACAAGG TAGTCTCTCT TAAGGAAAAA
CACGGATTCA CTATCGATGA AGCCAAGGTA AAGATCAAGA GACCGGTGTG TAGCACTTGT
GGGCTTGTGA AGAGATACGT CCTAGAGGAA GCGGCCCAAG AGCTGGGAGC AGATGTTCTG
GCCACTGGGC ATAACTTGAA TGATATGGCC GTATTCGTTC TATCAGGCTA TCACTCAGGA
GATTTAAGTA ATCTGGCTAG GCTGAGGGCG GTTTCACCTG CTGAGAATGG GTACATCAGA
AAGATAAAAC CACTTTTCCT GGTATCAGAA AAGGAGACCA CCACTTATGC CTTGATCAAC
GGTATCCCCT TCATCATGGA CTCCTGCCCC AATAATCCAA GGGTTGGAGG CCCTACCTCA
GATAAACTAA GGCGGATAAT AGAGAACGCC GAGGATGAGA TACCTGGCTT CATGTTAAGG
TTAGTCGAGA ACTTTGAGAC CAAGATAAGG CCCTTCTTCG AGGATCTTCC CAAGTTTAAC
TTGGGTAAGT GTAAGATCTG CGGTAGACCC ACTAACAGTG ATAGGGAAAT TTGCTCCTTC
TGTGCGGTCA AGATCAAAAT GACTGGGGGA GAGAGTCAAA TTGTCAAGGG AAACTAA
|
|---|
| Protein sequence | MYCKKCGSKA IIKITSANLT LCSSHFTEWL EGRVERTIRD YGMIRGGERV AVAVSGGKDS
TTLLHVLAKL SGKMGFEVVG INIDLGIDRG TKYSSLSTEF AVKNFEKLGV EYKVVSLKEK
HGFTIDEAKV KIKRPVCSTC GLVKRYVLEE AAQELGADVL ATGHNLNDMA VFVLSGYHSG
DLSNLARLRA VSPAENGYIR KIKPLFLVSE KETTTYALIN GIPFIMDSCP NNPRVGGPTS
DKLRRIIENA EDEIPGFMLR LVENFETKIR PFFEDLPKFN LGKCKICGRP TNSDREICSF
CAVKIKMTGG ESQIVKGN
|
|---|
| |