| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1483 |
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| Symbol | |
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| ID | 5104730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1450849 |
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| End bp | 1451496 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507371 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_001191564 |
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| Protein GI | 146304248 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0977569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACTG TATTCACTGT GGATGGGAGA ATCTGGGAGG AGAGGGTTGA GTCCAGGCCA
AATAGGTTCA TGGTAAGGAT GGAGTCTGGC AACACATGTC ACCTTCACGA TCCAGGTAGA
CTCAAGGAGC TGATGTACCC TGGCAACAGA GTACTAGTAA GGGAGACTAG GGGAGCAAAG
ACGTCGTGCT CGGTCCTCGC TGGCTGGGAT AGTGAGTGGG TGATAATTGA TAGCAGATTT
CATCCAGTCA TTGCCAGAAG ATTTCTTCCG CCAGACGCGA AGGGCGAAGT TAGGGCTGGT
GAGAGTAGGC TCGACTTCCA CTTCGATGGC ATCTGGGTTG AGGTGAAGGG ATGTTCCCTA
GTTCGGAATG GGATCGCCCT ATTTCCTGAC GCACCCACTA AAAGAGGGGA GAAACATCTC
AGAGAGCTGA TTAGGTTGAG GCAGGAGGGT CATGGCTCAA TGCTCATGGT CCTAGTCATG
AGGCCTGCAA CATGTTTCCT TCCCAACGAG GAAACCGATC CTAGATTTTC TGAGGCCTTC
TGGGAGGCTA TGGATAGTGG AGTTAACCTT GTGGTCAAGT CGTTCAAGCT TGAGGGTAGG
GACATAGTTT ACGTTTCAGA CCTGGGATTA TGCCAGACGC GAAAGTAA
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| Protein sequence | MFTVFTVDGR IWEERVESRP NRFMVRMESG NTCHLHDPGR LKELMYPGNR VLVRETRGAK
TSCSVLAGWD SEWVIIDSRF HPVIARRFLP PDAKGEVRAG ESRLDFHFDG IWVEVKGCSL
VRNGIALFPD APTKRGEKHL RELIRLRQEG HGSMLMVLVM RPATCFLPNE ETDPRFSEAF
WEAMDSGVNL VVKSFKLEGR DIVYVSDLGL CQTRK
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