Gene Msed_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1482 
Symbol 
ID5104729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1450507 
End bp1450869 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content48% 
IMG OID640507370 
Producthypothetical protein 
Protein accessionYP_001191563 
Protein GI146304247 
COG category[S] Function unknown 
COG ID[COG1833] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0956236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGA ACAGGAAGGG ATACGCAATT CTCTTCGATT GTGAAAATGG GGAAGTAAGG 
ACTTCGGGGA GGGTATTCAG TATTACGAGG GGGACTTACG CCTACGTTGG ATCTTGCGGG
GTCAACTGCG GGAAAAGAGT TGGAAGACAT CTTAGCGATA GCCTAGCAAA GAGGAGATGG
CACGTAGACT ACCTTAAGGA CTTATGTAAA CCCCTTGGGG CACTGGTTCT CCCGCTAACA
GAGGAAGATA TTGCCAATAT CCTCACTGAC CCAGTGAAGG GGTTCGGGTC GTCAGACTGC
AGGAAACATA AGGGCGACCT ATTCAGGGTT GAGATTAAAA CCTTACTTTC GCGTCTGGCA
TAA
 
Protein sequence
MKWNRKGYAI LFDCENGEVR TSGRVFSITR GTYAYVGSCG VNCGKRVGRH LSDSLAKRRW 
HVDYLKDLCK PLGALVLPLT EEDIANILTD PVKGFGSSDC RKHKGDLFRV EIKTLLSRLA