| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1460 |
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| Symbol | |
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| ID | 5104830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1429812 |
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| End bp | 1431572 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507348 |
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| Product | thermopsin |
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| Protein accession | YP_001191541 |
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| Protein GI | 146304225 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTGT ATGAGTCTAA CACCTCTACC ACCCTTAGCG CAGGTCAATA CGAGTATTTC
CCGCTCAACG TTAACACAAC AGAGATACTT TCCTACTCCT GGAATTCAAC AGGTAGTGTT
GCAGTGATGG TAATGAACCA GACCCAACTT CAAGAATTTC TCAATGGTAC AGGAAGCCCC
TACAAGGGGT TGGTTATCCT GAATTCATCG TTCAGCAATC AAGTTCTGCT AACTCCCGGT
AAGTATTACT TTGTGCTCTA CGCCTACCTA CAACAGGTAA CCCTGCAGTA CAGCCTGAAA
CTGGTTCCAG CTCAGGTGTC CTATACCCTT CCGGTGGGGT ATCAGGAAAA TTATCAGTTG
AACCTAAGCT ATCCCTTTCA TCTTTACCTC TATCTAGTTT CCAATAACTC GTTCTCTGTG
AGGGTCACTT CAGGCAACGT TACTTACTTC AGTGCAGCTC CCTCCAGGGA TACTCCTCTT
ACTTTCGTCA ATCACACGTT AACCCTCAGC CCAGGCAACT ATTCCATTAC TGTGGTTAAT
CCTGGATCCT CAACGATAGC CGTTTATTCC TCAGTGCTGT ACGCCTCCAC TTATCCAGAT
CCCTTATCCT TGAATAGGAC AGATTACCCT ATGGGAGTGG CAAGTTATGG CCTATTTAAC
AGGTCAGGGG TACCAGTCCC GTACGTGGTC AAGGCATCCT CCGTAGTGGG GTTTGCAAAT
ATTTCCTCTA TCTTTGCTTA TAATCAGACT GCTGAGAAAC TGAATGTCTC CCCCTATTCG
GCGAGTTTAC AGTTAAATGT CCCACTGGTC GTGATAAACG GAAAGCAGAA CCAGACTTAC
TGGGTACAGA ACGTGATAGT TTTCATGACT AATGAGTCGA CCCTATGCTA CGAGTCCTCC
GTCTTAAACG TGACTAACGC GAATGCCACC TTAACAAACA TCTCTATACA AGGGAGAGGC
GGAGTGTATC CGCCCTTCAA TAATGGAATA TACTATACCT ACAAGACTAA GGGAGTGCAG
TACAAGACGC CCCTATCTCT CTTGATCTCC ATAAATGTAT CAGTGATAAA GAAACTTGGA
GTGAGAATAG GCTTCGATTA TAAGGTGCTT GAGAACGGTT CGGTAGTTAA CGGTAGCTGG
AACCAGTTTG ATTCTCCTCT CATTCTAGAC TCGGGAGTGT CACAGGCCTA TCTTTACGTG
GATGGATATA ACTCCCCATC TACCCTGAAT TTCTATGATG CTGAACTAGT TTTTGGAGGC
GGAGGAAACG GAGAGGTGGC ATATTTCCAG AACCTTTCGG CTACCCTTGC CATCTTCTAC
TATAACGGAT CTCTTCATCC CTTCCCAAGT GTGTATAGCT TCGGCGCAGA TACTGCCGAG
GGCACGAGCG ACTTACACGT GTCATTAATG AATGGTCTGG TTTCCGTTTC TAAGGGTCAG
GACAACCCAG TCTTTCTCAC GAACCAGTTT AATGCGTCCA TACCGGTATT GCGAGTTGTC
GTTAATCATG TTCAAAACAA GAGCTCTGTG TCTAACGTTA CCACTACTAC AACTCATACG
AACACATCAA CTTCCACCAG TTCCAATGTT ACCAAGAATA CTGTACCTCC ACCAAGTAAC
ACTAGCCAGA CTTCTAGCGC CCCTACGAAG AAGGGTGGGC TTCCCCCTTA CCTTCTACCT
GGGCTAGTGA TTGCCGTAAT CGTCGTGATA GTAATATGGG TGCTCATTAA CAGGTTCAGA
AAGCCCGACC TGAATATATG A
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| Protein sequence | MNLYESNTST TLSAGQYEYF PLNVNTTEIL SYSWNSTGSV AVMVMNQTQL QEFLNGTGSP
YKGLVILNSS FSNQVLLTPG KYYFVLYAYL QQVTLQYSLK LVPAQVSYTL PVGYQENYQL
NLSYPFHLYL YLVSNNSFSV RVTSGNVTYF SAAPSRDTPL TFVNHTLTLS PGNYSITVVN
PGSSTIAVYS SVLYASTYPD PLSLNRTDYP MGVASYGLFN RSGVPVPYVV KASSVVGFAN
ISSIFAYNQT AEKLNVSPYS ASLQLNVPLV VINGKQNQTY WVQNVIVFMT NESTLCYESS
VLNVTNANAT LTNISIQGRG GVYPPFNNGI YYTYKTKGVQ YKTPLSLLIS INVSVIKKLG
VRIGFDYKVL ENGSVVNGSW NQFDSPLILD SGVSQAYLYV DGYNSPSTLN FYDAELVFGG
GGNGEVAYFQ NLSATLAIFY YNGSLHPFPS VYSFGADTAE GTSDLHVSLM NGLVSVSKGQ
DNPVFLTNQF NASIPVLRVV VNHVQNKSSV SNVTTTTTHT NTSTSTSSNV TKNTVPPPSN
TSQTSSAPTK KGGLPPYLLP GLVIAVIVVI VIWVLINRFR KPDLNI
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