| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1457 |
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| Symbol | |
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| ID | 5104827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1426534 |
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| End bp | 1428507 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507345 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001191538 |
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| Protein GI | 146304222 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAA CGAAAAGTAT CTGCCCATAC TGTGGAGTAG GGTGCGGTCT TATACTTGAG
GGTGAGAATA ACGTAGTTGC GAGAGTGTAT CCAGACCGCG ATCACGTGGT TAGCAAGGGT
CACATATGCG GTAAAGGGAG TACAGCCCAC GAACCTGGAA ATAGTTGGGA CAGGCTTCTG
TATCCCCTGA AAAGAGAAAA GGACATCCTA GTCAGGATTT CGTGGGACGA AGCTATCCGA
GAGATCGCGT CAAAACTCTC GGAGATAAGG AGCAAGTACG GTCCTAGTGC CATAGGATTC
TACGGAGGTT GCCAGAACAC CCTTGAGGAG GGATATACCA TGATGAAGCT AGCAAGGGCC
TTAGGAACCA ATAATGTGGA TTCATGTGCG AGAGTTTGTC ACGATCCCTC AGCTACAGCC
CTAAAGGAGA TGGTAGGCCT CGGTGCAACC TCAACCTCAG TTACGGAGAT ACCCAAAAGC
AAGGTCTTGG TTATAGTTGG AGAATCACTA ACCGAGAGCC ATCCCGTCCT AGTTCAGTAT
CTCTCGATGT TGAAGAAAAA TAACGGCAAG GTAGTAGTGA TAGACCCTAG GGTAACAGGA
ACTGCGAGGT TGGCTGACCT TCACCTCAGG GTTAGACCTG GTACAGACAT TTACCTGTTT
AATGCCGTTG CCAACTACTT GATCTCCAAC AACATCTACG ACAAGAAGTT CGTTGAGGAA
AGGGTGGAAG GATTCGTTGA GTTCTCTAGG CTTGTTAAGT CCTACACAAT CCAAGGAGCA
GAGGAAATAA CGGGGATAGA TCAGTCCGCT ATCCTCGAGT TTGCCAAACT AATATCGCAG
AAACCTGTCA TCTTCTCCTG GGGTCTGGGG CTTACCCAGA CTGGAGGGCC TAAGGCAGTC
CGTAGCCTAA TTAACCTCGC CCTGCTTACA GGCAATGTGG GTTTCGAGGG AGCGGGCCTC
CTAGTATACA GGGGACAGAC CAATGTACAA GGATCAGGAG ATATGATTAA GCCCAACGTG
TTTCCCAATG GTCCCATGAC GCTGGAAACG GCGAGGGAGC TGGAGAAGCT ATGGGGTTTC
TTGCCTCCCA CATGGGAAGG TAAAACTGTA ACTGAAGCCC TCCTTGAGTC GGACATGAAG
GCCGTGGTAC TCATGAACTT CAACCCTGCA GTGAGTTTCC CAAACAGACA GAAGGTTGAG
AATTTCTTGA AGTCCCTAGA GCTTCTGGTA GTTATGGATC CCTTCATGAC AGAGACCGCA
AGGTTTGCAC ACTACGTCCT GCCGTCGGCT ATGTGGACCG AGAAGGAGGG TTCCGTCACC
AGCCTTGATA GAGTTGTGAA ATGGAGGTTT AGGGCAGTAT CTCCTCCAGG AGAGGCGAAG
GAAGAGCTCG AGATCCTGTC CCTCCTCGCA GATAGACTGG GATTCAAGGG ATTTTCCAGG
GATCCAAAGG AGGTATTCAA GGAATTGAGG AGCGTGGTCA AGATCTACTC TAACTTAACT
TTGGATCAGG TCATGGACTA CTCATCCCCC TCAAGATACC CAGAGAACGA CCCAGTTCTC
TACAGAACAA GGTTCTATAC TGCAAGTGGG AAGGCTAAGT TGAAGTTTGA GGAACAACCA
GAACCCAAGA AAGGTCTCAT CTTGATAACG GGCAGAGCGG TAACTAGGTA CAACACAGAC
GAGATGATAA GCAGAACACC TGGATTCGGC CAACTTACAC CCGTGATTTA CCTTAATCCA
AGGGACGCAC AAAACCTGGG TATCAAGGAT AATGACCTGG TAAAGGTATC CTCAAGATGT
GGTATGGCAA TCCTAAGCGC CAAAATCTCC CCCGACGTGT TAGAGGGAAC AACTTTCGCG
TATATGCACG TCCACAGTAT CAATAATGTA GTCTGTGATG AGCTGGATCC AGAAACTAAA
ACTCCGAGAT ATAAGTACAC TGAGATAACT ATAACAAAAA TTGAATGGGT CTAG
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| Protein sequence | MLETKSICPY CGVGCGLILE GENNVVARVY PDRDHVVSKG HICGKGSTAH EPGNSWDRLL
YPLKREKDIL VRISWDEAIR EIASKLSEIR SKYGPSAIGF YGGCQNTLEE GYTMMKLARA
LGTNNVDSCA RVCHDPSATA LKEMVGLGAT STSVTEIPKS KVLVIVGESL TESHPVLVQY
LSMLKKNNGK VVVIDPRVTG TARLADLHLR VRPGTDIYLF NAVANYLISN NIYDKKFVEE
RVEGFVEFSR LVKSYTIQGA EEITGIDQSA ILEFAKLISQ KPVIFSWGLG LTQTGGPKAV
RSLINLALLT GNVGFEGAGL LVYRGQTNVQ GSGDMIKPNV FPNGPMTLET ARELEKLWGF
LPPTWEGKTV TEALLESDMK AVVLMNFNPA VSFPNRQKVE NFLKSLELLV VMDPFMTETA
RFAHYVLPSA MWTEKEGSVT SLDRVVKWRF RAVSPPGEAK EELEILSLLA DRLGFKGFSR
DPKEVFKELR SVVKIYSNLT LDQVMDYSSP SRYPENDPVL YRTRFYTASG KAKLKFEEQP
EPKKGLILIT GRAVTRYNTD EMISRTPGFG QLTPVIYLNP RDAQNLGIKD NDLVKVSSRC
GMAILSAKIS PDVLEGTTFA YMHVHSINNV VCDELDPETK TPRYKYTEIT ITKIEWV
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