| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1431 |
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| Symbol | |
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| ID | 5104801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1401038 |
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| End bp | 1402750 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507319 |
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| Product | hydrogenase 4 subunit B |
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| Protein accession | YP_001191512 |
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| Protein GI | 146304196 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.832858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCTAG AACTCGACCT AATTTACATA CTATCTGCTC TTTCCTTAGT TACATCCCTC
TTCAGCAACA GAATATCTTT AGTGCTTCTC GTGTTAGCTT CTGGGATACT TGCCTTTTAC
GGTGTACAGG AACTACCCAT GGGTATATTC TACCTAGTCG CGGGATTGGT ATGGGTTCTG
GTCGCTTTAC ACTCCTTGTT CCACTATAGC GATAAGTGGC TCACTATGAC CCTAAGTGGT
ACTGTACTAG GGATCATTGT GGTTCTTACC AGCACGAACT ACATCGAGTT TCTCGCGGGA
TGGGAAACCA TGACGCTTTT CTCGTTCGTT GGAATAGCGA TCTACAGAAA GGACTGGAAA
CCTGCATTAA CTTTCCTTGC GTTCGGGGAG CTGAGCACTG CATTACTGCT AGCCGGTTTC
GCCCTTGCCT ACTCTCAGAC AGGTAGTCTA GTATTCGAGA GGTTAAGCAC TCAGCTCCCC
CTCATTATAA CGTCAATGGG TTTCATCGTC AAGATGGGAA TATTCCCATT CCTTGTCGTG
GAGTGGTTGC CCATAGCCCA CGGAAACGCC AGGTCGGATC TATCAGCAGT TCTAAGCGCA
ACGGTAACCA TGACAGGGAT TTACGGAATA TTGAAGATGG AGTCCTTGAG TCCCGTTTCG
ACGTATCTGG GAATATTCCT TCTCGCCGTG GGAGCCTTCT CCAACCTGTT TGGTGCCCTA
TACTCCTATG TCTCCGATCA TGTTAAGGGA TTGCTAGCGT TTAGCACCAT CGAAAATAAT
GGTGCCATGC TAGCTCTGTT GGGAAGCCTA GAGCTTGTGA GCGGAGACTT GAAGGAGTTC
GTCACGTTTA GTCTTTTTAC TTACGTAATA GCTCACTCCC TCGCTAAGAC AGGGCTTTTT
CTTTCAACTG GATATGTTGA GGGAGAATCG CTGACAACTG CAAGCTCCTT TAGATATGGT
CTCTCAGTTC TAGGAGCAGT CCTGATGGCC ATGTCGTTAT CGGGGCTTTT GCCTACCATA
GGGGGAATCG CGACGTGGTC ATTGCTGGAG TCGATGTTCA TGGAAGCTAT AACACTACCG
CACTTCATCA ACATTGTCCC AATAGTGGCA GGTGTCATGA TAGGCATGGG AGAGGGATTT
GCCACCGGAT CCCTTGCGAA GTTCGTATCA TACACTCAAC TGACAAAACC GATCAAGGAC
AAACAGGGAC TCATCCTTGC AGTTTCTGGG ATCCTCGTCT TAGTTACTGT GGGCCTGGCG
TATCTTCTTT CTCCCTTCAG AACAGAGGTG TCCCAGCTTG GGGTTGGGCT AAATTCCCTT
ATCTCCTCGC AATATCAAAG AAGTTTTGGA GGGATTGATC CGCTTTATAT CTTAGTTTCA
TGGCCGATTA TCGCATTAAT AGTGTACCTG TCCCTAGGTA AGAGAAAAAT AAGAGTTGTA
GACCCTTGGG ATAATGGATC TGCTCAAGGA TTTAGATACA CCTCCTTTGG CATGGCAAAT
AACGTGAGAC TGATGTTAAG GGCTTTACTT AGAACCAAGA CTGGATCCCT GGAGACTAGC
GCTGACATCT TCTGGCAAGC CATGTTAGTT TTAATCAGAT GGTATCTCAA ATTCTCTAGA
ACCTTCTCCA GGAGCTTCAT GAATGGCTCC CTGAGATGGT ACATGGTTTA CATGATAATT
GCCATTGTCG TCATAATGGT GATCACGTTA TGA
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| Protein sequence | MILELDLIYI LSALSLVTSL FSNRISLVLL VLASGILAFY GVQELPMGIF YLVAGLVWVL
VALHSLFHYS DKWLTMTLSG TVLGIIVVLT STNYIEFLAG WETMTLFSFV GIAIYRKDWK
PALTFLAFGE LSTALLLAGF ALAYSQTGSL VFERLSTQLP LIITSMGFIV KMGIFPFLVV
EWLPIAHGNA RSDLSAVLSA TVTMTGIYGI LKMESLSPVS TYLGIFLLAV GAFSNLFGAL
YSYVSDHVKG LLAFSTIENN GAMLALLGSL ELVSGDLKEF VTFSLFTYVI AHSLAKTGLF
LSTGYVEGES LTTASSFRYG LSVLGAVLMA MSLSGLLPTI GGIATWSLLE SMFMEAITLP
HFINIVPIVA GVMIGMGEGF ATGSLAKFVS YTQLTKPIKD KQGLILAVSG ILVLVTVGLA
YLLSPFRTEV SQLGVGLNSL ISSQYQRSFG GIDPLYILVS WPIIALIVYL SLGKRKIRVV
DPWDNGSAQG FRYTSFGMAN NVRLMLRALL RTKTGSLETS ADIFWQAMLV LIRWYLKFSR
TFSRSFMNGS LRWYMVYMII AIVVIMVITL
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