| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1412 |
|---|
| Symbol | |
|---|
| ID | 5104622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1379001 |
|---|
| End bp | 1380338 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640507301 |
|---|
| Product | pyruvate kinase |
|---|
| Protein accession | YP_001191494 |
|---|
| Protein GI | 146304178 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000231842 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00097059 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGAA GGACGAAAAT TGTCGTCACA CTAGGTCCTT CCACTGAGGG TTTGATCCCC
AAGCTTAAGG ATAAGGTGGA CATTTTTAGA GTTAACTTGG CACACGGGGA TTACGACTCC
CATGCCAGGT ACTTTGAACT TTTGAGGTCT GGGGCTCCCG ATTCCTCCAT TCTTGCTGAT
CTTCCAGGTC CTAAACTGAG GGTAGGGGAT ATAGGAAAAA TGGAGCTTAC AATGGGCCAG
GAGGTTCTCT TCTCTCCCGA CGAAGGGATA GTGGTTCAGG AACCGCTGTT CTATAGGAGC
GTAAAACCGG GCTCTATCAT TCTTCTGGCA GATGGTCTCA TAAAGATAAG GATCAAGGAG
GTTTCTGGAG ACCAGGTAAG GGGGATAGTG TTAACTCCAG GGACTCTCAC CTCTAGGAAA
GGAATTAACA TCCCCGACAT GGCCCTTGAT TCTGGACTTA CCGAAAATGA CTTTAAGCTA
ATGGAGGAGG CCCTATCCCT AGGAGCAGAT TACGTTGGAC TCTCATTCGT GCTCAGTGAA
AATGACGTGA TGAAGGCCAA GGAAAAGATA CAGGGAAGAG CGTGGATTAT CTCTAAAATC
GAGAAAGGTC AAGCTGTACA GAGGCTCTTC AGGATTGTGG AGGAAAGCGA TGGAGTTATG
GTGGCTCGAG GGGATCTAGG GGTCGAGATT GGTTTGGAAA ATCTGCCATA TGTTCAACGC
AAGATCATCA GGATATCAAA ACAACTGGGA AAACCGGTCA TTCTTGCCAC CCAGGTACTA
GAGTCCATGG TAAGCAACCC ATTACCCTCC AGGGCAGAAG TAATTGACAT CGCCAACTCG
GTGTACCAGG GTGTGGACGC CATAATGCTT AGCGACGAAA CCGCAGTAGG CAAGTATCCC
GTTGAGGCAG TCCAATACCT AGATCAGATA ATTTCCTCAT CAGAGGACAA GGTTAAACCC
CTAAGTCCCT CACCCATGAG GAGTCCAGAC GACGCAGTTG CCTATGCTTC CTCGTCGCTA
TCAGAGCTCT CCAAGTCCCA CGTAATAGTT GTTCATAGCA GGAGTGGCCT CTCAGCCATA
AGGGTTTCAA GGCTTAGGCC TAAGGCCATG ATTCTAGCCT TCACTCCAGA TATCAAGGTA
GCCAGAAGGC TCAAGATATG TTGGGGAGTT ACTCCCATAT CCCTAGAGGA GGGTGCCAGT
GACCTCAATG ATCTAGTGTC TATCCTCGAA AGAAAATGTA GGGAACTGGG AGTTAAGGGT
AATGTGGTCA TTGTAGCAGG GGATCCTAAG ATGGAGTCAG GTAGGACCAA CCTGCTGAAG
CTTCACTCAA TCGACTAA
|
|---|
| Protein sequence | MTRRTKIVVT LGPSTEGLIP KLKDKVDIFR VNLAHGDYDS HARYFELLRS GAPDSSILAD
LPGPKLRVGD IGKMELTMGQ EVLFSPDEGI VVQEPLFYRS VKPGSIILLA DGLIKIRIKE
VSGDQVRGIV LTPGTLTSRK GINIPDMALD SGLTENDFKL MEEALSLGAD YVGLSFVLSE
NDVMKAKEKI QGRAWIISKI EKGQAVQRLF RIVEESDGVM VARGDLGVEI GLENLPYVQR
KIIRISKQLG KPVILATQVL ESMVSNPLPS RAEVIDIANS VYQGVDAIML SDETAVGKYP
VEAVQYLDQI ISSSEDKVKP LSPSPMRSPD DAVAYASSSL SELSKSHVIV VHSRSGLSAI
RVSRLRPKAM ILAFTPDIKV ARRLKICWGV TPISLEEGAS DLNDLVSILE RKCRELGVKG
NVVIVAGDPK MESGRTNLLK LHSID
|
|---|
| |