| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1377 |
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| Symbol | |
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| ID | 5103436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1352617 |
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| End bp | 1353264 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507266 |
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| Product | ABC transporter related |
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| Protein accession | YP_001191459 |
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| Protein GI | 146304143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.874611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000287507 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGAAAAT CGACTCTGCT TAGGATACTA GGTGGGTTCA TAAGACCCTC CGAAGGGGAA
GTAAGGCTAA TGGGAAAGAA GGTTCTACAT CCTACCCCCA GGATAGCCCT CATTCACCAG
TCCATAGCAA CCTTCCCCTG GTTAACCGCT TTGGAAAACG TTAAGCTTGG TCTGAAGTAC
AGGAAACTTC CGAAGGAGGA GGAAGAGAAG ATAGCCAGAA AGATGCTTGA GCTCGTTGGG
CTTCAGGGAT TTGAGGACTT TTACCCTAAG CAGATGAGTG GAGGAATGAG GCAGAGGGTA
GCCATAGCTA GGGCCCTGGC AGCCGATCCC TATGTTCTTC TCATGGATGA GCCCTTTGCT
CATTTGGACG AATTGACTGC CGAAGGTCTG AGGCAGGAGA TTTACTCCAC CATATTCAGT
GAGGACACCT CTCTCAAGAC CGCTGTCATG GTTTCCCACA ACATGAATGA GGTTGTGGAG
CTATCAGACA AGGTTTACGT ATTGAATGGA AGCCCAGCTA CAGTCGTGGG AGAGGTGATC
ATAGACCTGG AGAGGCCTAG AAACCCTAAG GATCCGAGAT TCCAGGAATA TCTGGACACG
TTGTATAAAC TTCTCACCCC CGTTAAGAAA AGGGTGAAGG AGAGTTGA
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| Protein sequence | MGKSTLLRIL GGFIRPSEGE VRLMGKKVLH PTPRIALIHQ SIATFPWLTA LENVKLGLKY
RKLPKEEEEK IARKMLELVG LQGFEDFYPK QMSGGMRQRV AIARALAADP YVLLMDEPFA
HLDELTAEGL RQEIYSTIFS EDTSLKTAVM VSHNMNEVVE LSDKVYVLNG SPATVVGEVI
IDLERPRNPK DPRFQEYLDT LYKLLTPVKK RVKES
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