| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1376 |
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| Symbol | |
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| ID | 5103435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1351004 |
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| End bp | 1352620 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507265 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001191458 |
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| Protein GI | 146304142 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.856839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00160873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGATTTTTC CGCTTCTAGC ATTACTCGCC GTTGGAGTTA CGGTGGGGAG AGTATTTATC
ACGATCATTC TCTCCATTGT AACTGGATGG CTCCTAGGTT ATCTGGCCTT AAAGAATAGG
GCCTTCGAGA ACGTGTATAT TTCCCTGTCA GAGGTCCTGG AGTCAGTCCC CGTTATCTCC
TTCTTCCCCG TTGTACTCAT CTTCTTTGTC TCGGATATAG GAGGGTTTCT CGGTACTCAA
CTAGCTGTAA TATTCCTCGT ATTCACTGCC GTAGTCTGGA ACATATGGAT GGGAATTTAT
CAAGCCTTCA AGACCGTTCC TGAGAACCTG AACGAGGTAG CTGAGAACTT AAGGCTTGGG
TTTCTTGGCA AGATGTCCAA ACTATACATC CCCTTCTCGA TTCCTAGGAT TGCAGCTAAC
CTGATCCCCA GTTTTGCGGA CGCAATGTTC TACATAACCG TGAGTGAGGT CTTCAGTGTA
GGCAATAGTA ATTACGCAGT ATTCGGTATT GGGTCCCTGA TCTCTAGGCT AACCACGCTT
GGACTCTACA ACCAGGCCCT TTACGCCCTG GGAATTCTAG CGGTGGTTGT AGTTTTCATT
ACCTTTGGCC TTAGGGAATT TGCCTCCTTC TCGGTTCAAA GATATGGCCT TGATACGGAA
TCCTCCAACA AGGCCTTGAG GAGAGGGAGG TTTAGGATTA GATATTCTGC GAAGGTAAGC
AATGCCATAG CCCCTGTAAG CAAATTAGCT AGATATGTAA CAAGGAGCAA AACAGTTCCT
GTAGATGTAG ATGAAGAGGA GGAGAAAGTA CGCCAATGGG GAAAGATCGG GATAGTGATT
GCGGCTCTCT TCCTCCTAGG AATATCATAC TCCGTGTTCA CAGTGATACG AAGCGTATCT
CCTCAAACCT GGAGCTTCTT AATTTCTTCA ACTCCGTACG ACCTAGTCCT AATAGGAATA
GATTACATGA GAGTCGGGGT AATATCTGTC GTTTCCTTGT TGATCGCCAT CTTTGTGGGA
TACTGGCTCT CTGTCCACGA GAGAACCGAG AGAGTGGTCA TCCCAATGAT TCAGACCGTG
GCCTCCTTCC CGGCACCAGC ATATTTCCCT CTTCTATACG GGGCAACATA CCCAATCCTG
AGACCGGTTT TAGGCGGTTT CACCAGCGAG TTTTACGTCC TCCTGCTGGG CTTCATCTCC
ACCTTCTATT ACGTCTTTTA TAGTTACTGG ATGGGGATAA AGAACATGCC CAAGGAGTAC
TGGGAAGTGA TGGATAACTT GAACTTAACC TTTTGGCAAA GGTTGAGAAG GGTGGTAATC
CCCTCAGCCA TGCCATACAT AGTGGCAGGG TTAACGAGTA CGGTGAACAG TGCATGGGGA
GGCCTGGCCA TAGGAGAGTA CTGGCCAGAT ATATATGACG GGAGAACCCT CGAGGTACAT
CAGGGACTAA TGAGGGAGCT GGCACTAGCA GATAGTCAGG GCAAACTTGC TCTAGTGGGT
TGGCTTTCAA TCCTTTTCGC CATTGTTGTG GTTATATACT CCCTCTTCTT CACTAGGAAG
CTCATGGATC TAGCTAGACA GAAATACGTG GCTGAGGAAG GGATATACGC TGCCTAA
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| Protein sequence | MIFPLLALLA VGVTVGRVFI TIILSIVTGW LLGYLALKNR AFENVYISLS EVLESVPVIS
FFPVVLIFFV SDIGGFLGTQ LAVIFLVFTA VVWNIWMGIY QAFKTVPENL NEVAENLRLG
FLGKMSKLYI PFSIPRIAAN LIPSFADAMF YITVSEVFSV GNSNYAVFGI GSLISRLTTL
GLYNQALYAL GILAVVVVFI TFGLREFASF SVQRYGLDTE SSNKALRRGR FRIRYSAKVS
NAIAPVSKLA RYVTRSKTVP VDVDEEEEKV RQWGKIGIVI AALFLLGISY SVFTVIRSVS
PQTWSFLISS TPYDLVLIGI DYMRVGVISV VSLLIAIFVG YWLSVHERTE RVVIPMIQTV
ASFPAPAYFP LLYGATYPIL RPVLGGFTSE FYVLLLGFIS TFYYVFYSYW MGIKNMPKEY
WEVMDNLNLT FWQRLRRVVI PSAMPYIVAG LTSTVNSAWG GLAIGEYWPD IYDGRTLEVH
QGLMRELALA DSQGKLALVG WLSILFAIVV VIYSLFFTRK LMDLARQKYV AEEGIYAA
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