Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1365 |
Symbol | |
ID | 5103424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1336007 |
End bp | 1336450 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640507254 |
Product | dual specificity protein phosphatase |
Protein accession | YP_001191447 |
Protein GI | 146304131 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTACTGGG TGAGGAGAAA CAGAATTGGC GGATCCCATA TGCCCTCTCA CCTGGAGGAG ATTCGTGATT GGAAAAGGAA GGGCGTGAGG AAAATACTTG TCCTGGCAGA GGACTGGGAA ATAGAGGAAG CATGGGGAAA CCCGGAGTAC TATTTCTCTC AACTTAGGGA GGAGGGGTTC CAGTTCCTAC ATGTTCCAGT TCCAGACGGA TATGCACCAA CCATGGAGCA GTTTCAGGAA ATAATGAAAT GGTTAGACAC GGGAAGTAAC GTGGTTCATT GCGTTGCGGG CATGGGAAGA ACAGGTACCG TTCTCGCAGG CTACCTGGTC CTGAGAGAGG CGATGAGCCC TGATCAGGCA GTGGAGGAGG TCAGGAGGTA CAGGCCAGGA GCCGTCCAAA CAATGCAACA GTTCATGTTT CTTCATGAGT TGACCAAGTC TTGA
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Protein sequence | MYWVRRNRIG GSHMPSHLEE IRDWKRKGVR KILVLAEDWE IEEAWGNPEY YFSQLREEGF QFLHVPVPDG YAPTMEQFQE IMKWLDTGSN VVHCVAGMGR TGTVLAGYLV LREAMSPDQA VEEVRRYRPG AVQTMQQFMF LHELTKS
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