Gene Msed_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1365 
Symbol 
ID5103424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1336007 
End bp1336450 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content51% 
IMG OID640507254 
Productdual specificity protein phosphatase 
Protein accessionYP_001191447 
Protein GI146304131 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTACTGGG TGAGGAGAAA CAGAATTGGC GGATCCCATA TGCCCTCTCA CCTGGAGGAG 
ATTCGTGATT GGAAAAGGAA GGGCGTGAGG AAAATACTTG TCCTGGCAGA GGACTGGGAA
ATAGAGGAAG CATGGGGAAA CCCGGAGTAC TATTTCTCTC AACTTAGGGA GGAGGGGTTC
CAGTTCCTAC ATGTTCCAGT TCCAGACGGA TATGCACCAA CCATGGAGCA GTTTCAGGAA
ATAATGAAAT GGTTAGACAC GGGAAGTAAC GTGGTTCATT GCGTTGCGGG CATGGGAAGA
ACAGGTACCG TTCTCGCAGG CTACCTGGTC CTGAGAGAGG CGATGAGCCC TGATCAGGCA
GTGGAGGAGG TCAGGAGGTA CAGGCCAGGA GCCGTCCAAA CAATGCAACA GTTCATGTTT
CTTCATGAGT TGACCAAGTC TTGA
 
Protein sequence
MYWVRRNRIG GSHMPSHLEE IRDWKRKGVR KILVLAEDWE IEEAWGNPEY YFSQLREEGF 
QFLHVPVPDG YAPTMEQFQE IMKWLDTGSN VVHCVAGMGR TGTVLAGYLV LREAMSPDQA
VEEVRRYRPG AVQTMQQFMF LHELTKS