Gene Msed_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1364 
Symbol 
ID5103423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1335409 
End bp1335978 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content49% 
IMG OID640507253 
ProductGMP synthase subunit A 
Protein accessionYP_001191446 
Protein GI146304130 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATAG GACTCATCTA CTTCGGTGGT CAATACAACC ACCTCATCCT GAAAAACGTG 
AAGTATCTAG GGGGAAACAT TGAAACCATT GATCCCTCCC TACCCCTGGA GAAGGTTAAG
GAGTATGATT GTCTCATCTT CAGTGGGGGT CCCCAATCCG TGAAGGAGGA GCTACACAGG
ATGGGAAATT CACCCCTGTT CGTCAGAGAG GTAAGCGTTC CGAAGCTGGG TATTTGCCTG
GGACATCAAC TTATAGCCCA TGTACTAGGT GGCGTGGTAG ACAAGGCAAG TACCCCTGAG
TTTGGACTCG TGAGAATTAA GGTAGAGGAT CACGACACAA TCCTGAATGG GGTACCCTCC
GAGTTTAACG CGTGGGAGAG TCACAACGAT GAAGTTAAGA CCCCACCTCC GGGGTTCAGG
GTACTCGCAA GCAGTGAGAC CACGAGGATA CAATCCATGG TGAACTCCGA TAACTCCATC
TTCACAGTTC AGTTCCATCC TGAGGTAAAA CACACGGAGC ACGGAATACA GGTACTTAAA
AACTTCCTTG AAGTATGTAA AGGTAGATGA
 
Protein sequence
MKIGLIYFGG QYNHLILKNV KYLGGNIETI DPSLPLEKVK EYDCLIFSGG PQSVKEELHR 
MGNSPLFVRE VSVPKLGICL GHQLIAHVLG GVVDKASTPE FGLVRIKVED HDTILNGVPS
EFNAWESHND EVKTPPPGFR VLASSETTRI QSMVNSDNSI FTVQFHPEVK HTEHGIQVLK
NFLEVCKGR