| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1363 |
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| Symbol | |
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| ID | 5103422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1334056 |
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| End bp | 1335318 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507252 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001191445 |
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| Protein GI | 146304129 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTC TAGTGATAGG GGCTGGACAT AACGGACTGA TAGCCTCTTA TTACCTCAGA
AAACTAGGTC TAGACGTAAC GGTTCTTGAG GCATCTCACA GGATCGGTGG AATGACTGAG
AGCGCGGTAG AGGCCAAGGC TGTGATAAGT AGGGCCTCAT ACGTCCTAGG GATTATGCCT
GAGTCTCTAC GAAGGGAATT TGAGATACCC ATAATTGAGA GCGAGATCTT TCAGACCATT
GAATATGACG GAGAACTCAT ACCGTTTTAT CGTGAGCCAA GGAGGAGAAG AGAGGTTCTT
GGTAAATATT TTCCTAAGTT CTCCGAGTTT GAGGATAAAC TCTTCAAGAT GAAAGAGATT
ATGTCATGGT TTACCTTTAC CTCAAGCCCT CCTTCAAGGG AAAAAATTCT CGAGGTAGCA
GAGAGGGAGG GCGTACCAGA AATGGTTAAG GACACCTCAG CTCACTTTCT GAAAGAATAT
CTCCCAAGGG AGGTGCACAG GTACTTCATA TACCCTTCCA TGGAGGACGC CCCAGCCTAT
ATGGTGGCTT ACTTCTATAA CGAGTGGTCC CTTGTTCCAA GCGGAATGGG CACAATTCCA
AGCCTCATAG AGAAGAAAGC TAGATCCCTG GGTGTGGAGA TCAAGACTAG GAGCAAGGTG
GATCAAATCG TGATTAGGAA CGGCAAGGTA ACAGGAGTGA AAGTTGGAGA TAGGGAATTG
AAGGCAGACT TGGTCGTGTC TGCAATTAGC CCCGTTGCTA CTTTCTCGAT GACAGAGCCG
TTGATGGACC TGAAACTGGA TCCGGGGAAA GGAGGATGGG TCAAGTACAA CGTGGTATTT
AGGGATGGAG TCAAGGTTAG GGACGATCTC AAGCCATACT TGCAGGGTAT AATTGACCTA
GAGGTGGGCG AAATTATAAT GCCCTCAGTC TTAGATGAGA CGAGAGGAGC CCCAGTCCTA
GAGTTCATGG GAGATAGGGA GGAGGTCTTG TCCATGTTTA GCGGGGAGAT CCTGTATGAG
GAGAAGATAA CTGCAGACTA TGCGTTGAGG TACTATCATG CACCGGGTGG GAACCTCAAT
CATCTGCCCA TGAGGTATCC CTACCTCTTT GATGGTAGAC CCGTAAAGGG ATGGGGTTAT
AGGACGCCAG TTAAGGGATT ATACCTCTCA GGGGCAGGAA CCTACCCCGG AGGACAAGTT
ACAGGAATAC CAGGTTACAA TGTGGCCTTG GCTGTGGAAG AGGATCTTCA ACAGGGTTTT
TAA
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| Protein sequence | MKALVIGAGH NGLIASYYLR KLGLDVTVLE ASHRIGGMTE SAVEAKAVIS RASYVLGIMP
ESLRREFEIP IIESEIFQTI EYDGELIPFY REPRRRREVL GKYFPKFSEF EDKLFKMKEI
MSWFTFTSSP PSREKILEVA EREGVPEMVK DTSAHFLKEY LPREVHRYFI YPSMEDAPAY
MVAYFYNEWS LVPSGMGTIP SLIEKKARSL GVEIKTRSKV DQIVIRNGKV TGVKVGDREL
KADLVVSAIS PVATFSMTEP LMDLKLDPGK GGWVKYNVVF RDGVKVRDDL KPYLQGIIDL
EVGEIIMPSV LDETRGAPVL EFMGDREEVL SMFSGEILYE EKITADYALR YYHAPGGNLN
HLPMRYPYLF DGRPVKGWGY RTPVKGLYLS GAGTYPGGQV TGIPGYNVAL AVEEDLQQGF
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