| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1354 |
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| Symbol | |
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| ID | 5103413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1325755 |
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| End bp | 1327737 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507243 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_001191436 |
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| Protein GI | 146304120 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0575606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTATTT CCGAGACCTT CGTCGAGAAA CTTAGAGATT CCCTTGGTTT CGCGCCCTAT
CCCTACCAGG AAAAGGTCGT GCAGGACGTT CTGGACAACT TGAGGAAGAG CCGTTTCATT
GTGGTTTCCA TGCCCACGGG ATCGGGTAAA ACCCTAGTGG AGCTTGCCCT AGCTGACTAC
CTAAGAGGGA AGGGGATGAA AGTCCTGGTC CTGGAACCCA CGAGACTTCT CTGCGATCAA
ATGTATCATA ACTTTTGGGT CAAAGTCTTT GATGATGTGG GGGAAGAGTA TGAGGGAAAT
TGCACCAGTT TCGAGGAAGG AAAGGGCGTG ATCGTGTCAA CTCCATTCAC CTCCTCCAAG
TGTATGCCAA AGGTTGATGC GGTCATCGTG GACGAGGTAC ACCACGCCTT TGGAGATCCG
AGGTACATGT CCGGCCTAAT TTCCATGAAG CCGAGGATAG TGATAGGCTT CACTGCCCTC
CTACCCAGTT CCAAGAGGTA TAGCATGGAC TCGAGGTTCG TGGAGGCCTT TGGGGTGCCC
TCTCTTCTGG CCTATGACTT CAAGAAGCTC TCCGAAATAG ATCCTTCCTT TACCTTACCC
AAGGCGATCG CGGATGTTTT TGATGCGGAG ATGGACGGTG TTGAGAACGT GGCGTACGAT
GCCCTCCTCA AGGGGAAGAT TCCAGGGGAC GAGAGGACGT TAAGCTTTCT AAGGTTTACC
CTGTATAGTC ACGGAAAGAC GGCCTTCTGC GAAAGTCTGG AAAACGTGAG AGATAAGGTT
TCAGATAACG TTACGTTGAG GACTCTCTGC AGTTCAGAGG GTATGGGACA TAAGGCTCGA
AGTCTTAAGG AGATACTCGA GGCCTACGAC GTCGAGGAAC ATCGGCCGGT CTTGATTTTC
ACTGCGAGGC GTTCCACGGC CCACGAGTTT GAGGTAATAC TCCATAACAT GGGGGTGAAC
CGAGTTAAGA CTTTAACCGG GGAGTTAAAC AAGGAGGAAC GCCTTCAGAT AGTTAATGAG
GCTAAGAGCG GTAATGTGGA CGTGATCATC TCTACGCACG TGGGTGAGGA GGGGATTGAT
ATCCCCGAGG CTAGGCTCCT CATAATGACA GATGTACCTA AGAGTCCACT CAGGTTCTAT
CAGAGACTCG GCAGACTAAT AAGGAAGAGC GAATCCAAGG GCGTAAAGTA TCTGGTCGTG
ACCTTAACTC CCAAGACTCC CGAGTACGAT GATCTGGATG AGGCTTTGCG ATCGCTTCAC
AGGGAGGGTG TTGACGTGAG TTACATTGTG GAGAGGAAGT CGGGGAAGGG ATCCACATCT
AGAATACTGG ATCAGGTTAA GGAGAAGGGA GGGGAGGTTC CCCTCATGAA GCTACTGGAG
ATGGAATATG ACCTGAAGGA CTACATAATG GTAAGAGGAA AGTCCAACGT CACTCAGTTC
CTTAACGCCA AGGAACAGGA TATTCCATAT TCTGACTTCG TCGATAGGGC AATCATGGAT
GGAGATCTCA TGTACTACTA TGACGTAGAG GGAATGGGAG ACCTGTTTGC CAAGATATTG
CTCTCCAAGT ATTGCCAACT ATGTTATGGT TCCCAGTGCC AGGGTTTATG TGATCTGGAC
ATCATGGTAC TTGGGAGAAG CAAACAGTAT AAGCTCACTA GAAAGGACCT TTTGAGGTAC
TTCATGGTGT TGTTCCCACC TGACAAGCTG ACGGATGTGG AGAAAAGAAT GGAAATCACT
TTCGAGAACC CAGGTTTCGG TATTTCCCTT CAGAGCAACG TAAATGAGAA GAACAGTTCC
ATCAGCTTCA ACGTTCAGTT AAACGCGTCA ATAAACGGTA TCACTGTCTA TCCTAAGATC
ACCCTGGCGT ATTATGGAGT AAAGAAAGAG GTTAAGGACT TCCTAAAAAA GAATGTCTTA
GCTATATGCA ATACTGCAGG CAAAATCTAT TTCTCTTATT TCACTTCCCG ACCTGTTCCT
TGA
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| Protein sequence | MSISETFVEK LRDSLGFAPY PYQEKVVQDV LDNLRKSRFI VVSMPTGSGK TLVELALADY
LRGKGMKVLV LEPTRLLCDQ MYHNFWVKVF DDVGEEYEGN CTSFEEGKGV IVSTPFTSSK
CMPKVDAVIV DEVHHAFGDP RYMSGLISMK PRIVIGFTAL LPSSKRYSMD SRFVEAFGVP
SLLAYDFKKL SEIDPSFTLP KAIADVFDAE MDGVENVAYD ALLKGKIPGD ERTLSFLRFT
LYSHGKTAFC ESLENVRDKV SDNVTLRTLC SSEGMGHKAR SLKEILEAYD VEEHRPVLIF
TARRSTAHEF EVILHNMGVN RVKTLTGELN KEERLQIVNE AKSGNVDVII STHVGEEGID
IPEARLLIMT DVPKSPLRFY QRLGRLIRKS ESKGVKYLVV TLTPKTPEYD DLDEALRSLH
REGVDVSYIV ERKSGKGSTS RILDQVKEKG GEVPLMKLLE MEYDLKDYIM VRGKSNVTQF
LNAKEQDIPY SDFVDRAIMD GDLMYYYDVE GMGDLFAKIL LSKYCQLCYG SQCQGLCDLD
IMVLGRSKQY KLTRKDLLRY FMVLFPPDKL TDVEKRMEIT FENPGFGISL QSNVNEKNSS
ISFNVQLNAS INGITVYPKI TLAYYGVKKE VKDFLKKNVL AICNTAGKIY FSYFTSRPVP
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