| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1348 |
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| Symbol | |
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| ID | 5103407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1320969 |
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| End bp | 1321325 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507237 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001191430 |
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| Protein GI | 146304114 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00624938 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGT GGTTTGAAAG GAGCGAGAAG GAAAGAGAGG TTGCTATTCT CTTGATGGAA
AGGGGTTATT TTCCTGAGGC GTGTTTTCAT TCGCATATGG CTGTGGAGCT GAAACTCAAG
GGATACATTC TTCAACGTAC GGGTTCAGTT ATGTACACTC ATTCCCTGAA AAGATTACTC
CAGGAAATCG CGAAATTAAA CGAGGTTAAA GTGAGCGAGG AATTGCTGGA TTGTGCAAAC
TTTCTCTCAA TGTTGTATAC CGGATCCAGA TACCCGGAAG AGAGTCTGGT GGACCTAGAC
AGACAGGAGG GTGAGAGATG TGTCAAATGC ATGGAAAGAC TACTCAATAG CGTCTGA
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| Protein sequence | MAKWFERSEK EREVAILLME RGYFPEACFH SHMAVELKLK GYILQRTGSV MYTHSLKRLL
QEIAKLNEVK VSEELLDCAN FLSMLYTGSR YPEESLVDLD RQEGERCVKC MERLLNSV
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