| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1322 |
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| Symbol | |
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| ID | 5104573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1299707 |
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| End bp | 1301404 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507211 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001191404 |
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| Protein GI | 146304088 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.033472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAGGCT TCATTTCCAA TCAAATAACA TCCGCTATCA TTGACGGCAC ATCGGTTGTC
TGGTTTCCAG TTCCCAAGTT CGACTCTCCC TCAATCTTCT CCAAGTTGGT TGATGAAAGG
GGAGGGGAAT TCTCCGTGGT GCCGGGAAAG GTAACTTACA TGGCTCAGGA ATACAGGGAC
CCAATGGTTC TCACAACTTA CGTGGAAACA GACCAGGGAA AGATGGTTAT CCAAGACCTT
ATTCCCATAG GGGAGACCAT TATTATAAGG AGGGTGGAGA GCGAGTTTCC CTTCAGGGTT
GTGTTCAATC CAATATTCCA TTATGGTCTC TACAGACCAG TTCCCGATGG CAATAGGAGA
ATCAATCCAA GGGGGAGGGA CTGTGTGGCG TTTCTTTATG AGTATGATGG AGAAGTGGAG
ATGGAGAGCG ACGATGTCTG GAAATTCTCA AGCGGAAAGG GATATCTCGT AGCTAATTAC
TCATCAGATG CCAAGCACGG TCCATTGAGC GAGAGGACCT CCCACCTATC CCTTGACTTC
TCCAGACCCT TTGAGAAGAC CGTTGAGTAC TGGAGAAGGT CCCTACCCAA GTCCAGGATA
TACCTAGAGG ATTTATACAC CACTTCACTT GCAGTTCTCC TGGGATCCAT CTACGCCCCT
TCGGGAGGTC CAGTGGCTTC CCCCACAACC TCCCTACCAG AGGTGATAGG TGGGTCCAGG
AACTGGGACT ACCGTTTTGC GTGGGTAAGG GACTCCTCTA TTATCGCCGA GTCCCTCCTA
GACGCGGATT ACGTGGTGAA GGCCAGGGAC ATAATTAACT TCTTGCTCTC CCTGATTAAC
TTCTCGTCGA AACCTTTCTT CTACCCCCTC TACACGGTGG AGGGAACTAT CCCACCTCCA
GAGAGGAAAC TTCCCTGGCT CTCAGGTTTC AGGGGATCTA GACCGGTTAC GGTGGGAAAC
GGGGCGTCAA CTCAGGTTCA GCTCGACGTC GAGGGATTTT TCATGGCAAC GCTCTACAAG
TACTTTGAGA AGACGGGAGA TAGGGTATAC ATTTACGATG CCCTCGAGAA GATTTTCTAT
CTCGCTGACT GGGAGGCAGA GAACTGGAGA ATGAAGGACT CAGGGATATG GGAAGATAGG
GGAGAGCCTC AGCACTACAT TCACTCTAAG GTGATGATGT GGGTTGCCAT GGACAGGGCT
GGGAAGATCG CGAGTACCCT AGGCATGCAG GATCGATGGA AGGACGCTAG GGAGGAGCTG
AGGTCCTGGA TTCTTGAACA GTCAGGAGAG TACTTTCCTA GATATCCAGG AAGTGACCAG
GTTGACGCCT CGATCCTCTC GGCACCCCTT TACGATTTCG TTGACGTTAA CGATAAGGTA
TTTCTAAATA CCCTACGCAG GGTAGAGAGG GATCTGGTTA AGGACGGATT CGTCAAGAGA
TATGTTTCGG ACTTCATGGG AGAGGCGAAA CATCCCTTCC TCCTCACCAC GCTTTGGCTG
GCAAGGATTT ACATAAGGTT AGGCGAAACA GGGAAGGCCA GGGATCTCCT GGAGAGGTTA
GACAGGGTCT CCGGCAGCCT TCACCTCCTA GGAGAGCATC TGGACACCTC CACCCTAGAG
TTCACCGGTA ACTTCCCCCA GGTTTTCGTT CACGCACAGG TTGTTTCGGC ACTCAAGGAA
CTGGAACGAT TTCAGTGA
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| Protein sequence | MLGFISNQIT SAIIDGTSVV WFPVPKFDSP SIFSKLVDER GGEFSVVPGK VTYMAQEYRD
PMVLTTYVET DQGKMVIQDL IPIGETIIIR RVESEFPFRV VFNPIFHYGL YRPVPDGNRR
INPRGRDCVA FLYEYDGEVE MESDDVWKFS SGKGYLVANY SSDAKHGPLS ERTSHLSLDF
SRPFEKTVEY WRRSLPKSRI YLEDLYTTSL AVLLGSIYAP SGGPVASPTT SLPEVIGGSR
NWDYRFAWVR DSSIIAESLL DADYVVKARD IINFLLSLIN FSSKPFFYPL YTVEGTIPPP
ERKLPWLSGF RGSRPVTVGN GASTQVQLDV EGFFMATLYK YFEKTGDRVY IYDALEKIFY
LADWEAENWR MKDSGIWEDR GEPQHYIHSK VMMWVAMDRA GKIASTLGMQ DRWKDAREEL
RSWILEQSGE YFPRYPGSDQ VDASILSAPL YDFVDVNDKV FLNTLRRVER DLVKDGFVKR
YVSDFMGEAK HPFLLTTLWL ARIYIRLGET GKARDLLERL DRVSGSLHLL GEHLDTSTLE
FTGNFPQVFV HAQVVSALKE LERFQ
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