Gene Msed_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1311 
Symbol 
ID5104562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1288631 
End bp1289140 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content49% 
IMG OID640507200 
ProductOsmC family protein 
Protein accessionYP_001191393 
Protein GI146304077 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.474766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCA ACAACATAGA CCAAGATGCG CTTCAGACCT TGAGGGAAAG GGGATCCAGG 
GAAGGATCAA TTCCCATGGA GAGGCATATA GAGGGAGAGT TTAGACTAGA AGGCTCCCCT
ATGTTTGTTG CCGAAATGAA GACCGAAACC ACAAAGGTAA TAGTAACGGC TGACGAACCC
AAGATCCTTG GCGGACAGGG AGTTCACGGA ACACCCTTAA GCTACGTTCT ATTCGGAGTC
ATGGCGTGCT TCGCCTCAAC TCTCGCCTTA GAAGCCTCAC AGGCTGGAAT AGTTATGGAG
AGGCTCAACG TGAGGGGACA CATATACTAT GATCTCGCTC CTGTGGTCAC GGATAAGGAG
GGCCCCATAA TAAAGAAACT GGTCCTTGAG GTGATCAGCG ATAAGGATCT TTCAAAGGTT
TTAGAGAGGG CTGAGAGAAA ATGCCCTGCT CTCTTCCTAG TGAAGAATCC GATCCCAGTG
GAGGTTAGGC AAACAGGGGG CACTCGATAA
 
Protein sequence
MRINNIDQDA LQTLRERGSR EGSIPMERHI EGEFRLEGSP MFVAEMKTET TKVIVTADEP 
KILGGQGVHG TPLSYVLFGV MACFASTLAL EASQAGIVME RLNVRGHIYY DLAPVVTDKE
GPIIKKLVLE VISDKDLSKV LERAERKCPA LFLVKNPIPV EVRQTGGTR