Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1311 |
Symbol | |
ID | 5104562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1288631 |
End bp | 1289140 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640507200 |
Product | OsmC family protein |
Protein accession | YP_001191393 |
Protein GI | 146304077 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.474766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCA ACAACATAGA CCAAGATGCG CTTCAGACCT TGAGGGAAAG GGGATCCAGG GAAGGATCAA TTCCCATGGA GAGGCATATA GAGGGAGAGT TTAGACTAGA AGGCTCCCCT ATGTTTGTTG CCGAAATGAA GACCGAAACC ACAAAGGTAA TAGTAACGGC TGACGAACCC AAGATCCTTG GCGGACAGGG AGTTCACGGA ACACCCTTAA GCTACGTTCT ATTCGGAGTC ATGGCGTGCT TCGCCTCAAC TCTCGCCTTA GAAGCCTCAC AGGCTGGAAT AGTTATGGAG AGGCTCAACG TGAGGGGACA CATATACTAT GATCTCGCTC CTGTGGTCAC GGATAAGGAG GGCCCCATAA TAAAGAAACT GGTCCTTGAG GTGATCAGCG ATAAGGATCT TTCAAAGGTT TTAGAGAGGG CTGAGAGAAA ATGCCCTGCT CTCTTCCTAG TGAAGAATCC GATCCCAGTG GAGGTTAGGC AAACAGGGGG CACTCGATAA
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Protein sequence | MRINNIDQDA LQTLRERGSR EGSIPMERHI EGEFRLEGSP MFVAEMKTET TKVIVTADEP KILGGQGVHG TPLSYVLFGV MACFASTLAL EASQAGIVME RLNVRGHIYY DLAPVVTDKE GPIIKKLVLE VISDKDLSKV LERAERKCPA LFLVKNPIPV EVRQTGGTR
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