| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1296 |
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| Symbol | |
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| ID | 5104707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1273931 |
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| End bp | 1274800 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507185 |
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| Product | 2-keto-3-deoxygalactonate aldolase / 2-keto-3-deoxy-phosphogalactonate aldolase / 2-keto-3-deoxy-phosphogluconate aldolase / 2-keto-3-deoxygluconate aldolase |
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| Protein accession | YP_001191378 |
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| Protein GI | 146304062 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTCG TTGTTCCCAT CCTAACGCCT TTCAATCCAG ACGGGACCAT CAACAGGGAA
GCCTTGAAGA CCCACGCCAC CAATCTTCTT GAAAAGGGGA TAGATCTAAT CTTCTTGAAC
GGAACGACAG GGTTAGGACC AGCCCTCTCG AAGGAGGAAA AGAAGGAAAC CCTTAGAACC
CTTTCAGACG TGGCTGACAG GGTCATATTC CAGGTAGGAG AGCTTAACTT AAACAATGTG
CTGGAACTTG TTAAGTTCTC CTCTGATTAC GGTGTAAGGG CTATAGCGTC TTACTCCCCC
TACTATTTCC CGAGGCTTCC AGAGAAATGG TTAATCAAGT ATTTTCAGAC TATTGCCTCC
CATTCCTCCC ATCCAGTGTA CCTTTACAAC TACCCGTTGG CCACAGGTTA TGATATATCA
GCTGAACTAC TTTCCAAGTT TGGCCTTGAG TTGGCAGGGG TAAAGGACAC GAATCAGGAC
CTGGCACATT CCATGAAATT CAAAACAACT TTCCCTAAGA TGAAGGTGTA CAACGGTTCT
GATACCCTAG CGTTTTACTC CTTGTTATCA CTCGATGGGA CGGTAGCCTC AATGTCCAAC
TGTCTCCCCA CAGTTTTCGT TGAGATGAAG AGGGCAATCT CACAGGGAGA CGTGAAGAAG
GCCTTAGTTC ACCAGAGACT GATTACCTCC ATTGTGGAGC TAGCAAGGAA ATATGGACAA
CTTGGTGCAC TTTACGTCCT AACTGAAATG ACGCAGGGAT ATTCGGTTGG GAGACCAAGA
CCGCCCATAT TTCCCCTTGA GGAAGGCGAG GAGAGGGAAC TCAAAAAAGA GGTAGAGAAC
TTCATCAAGG GTCTCGGTGT TAAAGCTTGA
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| Protein sequence | MEVVVPILTP FNPDGTINRE ALKTHATNLL EKGIDLIFLN GTTGLGPALS KEEKKETLRT
LSDVADRVIF QVGELNLNNV LELVKFSSDY GVRAIASYSP YYFPRLPEKW LIKYFQTIAS
HSSHPVYLYN YPLATGYDIS AELLSKFGLE LAGVKDTNQD LAHSMKFKTT FPKMKVYNGS
DTLAFYSLLS LDGTVASMSN CLPTVFVEMK RAISQGDVKK ALVHQRLITS IVELARKYGQ
LGALYVLTEM TQGYSVGRPR PPIFPLEEGE ERELKKEVEN FIKGLGVKA
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