Gene Msed_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1278 
Symbol 
ID5104690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1255257 
End bp1255598 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content44% 
IMG OID640507168 
ProductDNA polymerase beta subunit 
Protein accessionYP_001191361 
Protein GI146304045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGCT GGGTAAAGGA TAGATTCATG CACCTTTCCA GGTGGAGAGA GTATGCTGAA 
AAGATCGCTA AATCCGCTAA GGAGCTCTAT CCTCAGGCGG AAGTTTACGT TTTTGGTGGT
GTAGCTGAGG ACAGGATAAC GGTCCTGAGC GACATAGATA TCCTTGTCAT TTTACCTGGC
AAGAGTGTCC AGGAATTACG GGAATTAAGA ACTAGGATTT TCCTGAACGC AGTCGATAAG
TATGGTCTAC CCTTTGATTC GCCGGTTGAG CTTCACGTGG TTAACGAGGA GAGGGCTAAA
ATTTACTTTA GGCTTGCGAA AAAGATGATA AAAATTATAT AG
 
Protein sequence
MSSWVKDRFM HLSRWREYAE KIAKSAKELY PQAEVYVFGG VAEDRITVLS DIDILVILPG 
KSVQELRELR TRIFLNAVDK YGLPFDSPVE LHVVNEERAK IYFRLAKKMI KII