Gene Msed_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1267 
Symbol 
ID5104680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1242755 
End bp1243081 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content41% 
IMG OID640507158 
Producthypothetical protein 
Protein accessionYP_001191351 
Protein GI146304035 
COG category[K] Transcription 
COG ID[COG3432] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.751557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA AAAGGCGTGG GAAACTAGAA ATTTACCTTG ATATTCTGTC GATCTGTGCC 
ATGGGAGGGA AGAAGACTGA AATTATGTAT AGGGCAAACT TAAGCTATGA CCTACTTAAC
AAGTACCTTA ACGATCTTGA GCAGAACGGG TTCATAGTTA CAACCGGTAA TCTAAGGTGT
TTAACTGATA AGGGCCAAAG ACTGCTTGAC CTTCTGGTGA AACGCGAAAA TGTTAGGAAA
GAGGTAGAGG ATCTGGAATT CAGAATATCA ATGATGACCT CTCGTGCAGG GAGCCTGAAA
GAGATCGAAA TTAGTAAAAT CAACTAG
 
Protein sequence
MTTKRRGKLE IYLDILSICA MGGKKTEIMY RANLSYDLLN KYLNDLEQNG FIVTTGNLRC 
LTDKGQRLLD LLVKRENVRK EVEDLEFRIS MMTSRAGSLK EIEISKIN