Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1267 |
Symbol | |
ID | 5104680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1242755 |
End bp | 1243081 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640507158 |
Product | hypothetical protein |
Protein accession | YP_001191351 |
Protein GI | 146304035 |
COG category | [K] Transcription |
COG ID | [COG3432] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.751557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA AAAGGCGTGG GAAACTAGAA ATTTACCTTG ATATTCTGTC GATCTGTGCC ATGGGAGGGA AGAAGACTGA AATTATGTAT AGGGCAAACT TAAGCTATGA CCTACTTAAC AAGTACCTTA ACGATCTTGA GCAGAACGGG TTCATAGTTA CAACCGGTAA TCTAAGGTGT TTAACTGATA AGGGCCAAAG ACTGCTTGAC CTTCTGGTGA AACGCGAAAA TGTTAGGAAA GAGGTAGAGG ATCTGGAATT CAGAATATCA ATGATGACCT CTCGTGCAGG GAGCCTGAAA GAGATCGAAA TTAGTAAAAT CAACTAG
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Protein sequence | MTTKRRGKLE IYLDILSICA MGGKKTEIMY RANLSYDLLN KYLNDLEQNG FIVTTGNLRC LTDKGQRLLD LLVKRENVRK EVEDLEFRIS MMTSRAGSLK EIEISKIN
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