| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1233 |
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| Symbol | |
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| ID | 5103847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1211989 |
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| End bp | 1212699 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507125 |
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| Product | ABC transporter related |
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| Protein accession | YP_001191318 |
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| Protein GI | 146304002 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.954644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGCA TATCGCTGAC CAATGTCGTC AAGAGATTCG GACTAACGTA TGCCTTGAAC
GGACTCTCCT TCTCTATCCC CTGTGGTGGC AGATACTCCC TTCTAGGACC AAACGGCGCT
GGTAAGTCCA CGACCATGAA GATCCTAGCT GGCCTAATTA GACCTGACAG CGGTGAGGTC
ACGATCAAGG GAATGACTCC CGGAAGCAAG GAGGTCAAGA GGATACTTGC CTACCTCCCC
GAGGATCCAG TTCCGTATAG GATCCTGACG GTCAGGGAGA ACTTGGAGTA TTTCGCCTCC
CTCAGGGGGA TTCCGAATCC AAAGGAGAAG GCAGAGGAGA TGATTGACCT GTTTGATCTG
AGGGAGTACG AAAGAATTCA AGCGGGGAAA CTCTCTCGCG GAAACCAACA GAAGCTCTCG
CTTGCCCTGG TTCTCCTTCA CGAGCCTGAA ATAGTCCTCC TTGACGAACC CCTCAACTAC
CTGGACATAC CCACGCAGGA GAGGGTGATC AACATTCTGA GGGGGATGAA CTCGACCTTC
CTAGTCTCGA CCCACATAAT GTCGATTGCG TCAAGGCTCA CGGATCACGT AATCATGATC
TCGAGGGGGA AGGTGATATG GGCCGGTAGC ATATCTGAGT TGAGGGCCCT CGGAAGAGAA
GACGAACCCA TCGAGAGCGT GGTGTCGAGG ATGATGACCG ATGATCACTA A
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| Protein sequence | MDCISLTNVV KRFGLTYALN GLSFSIPCGG RYSLLGPNGA GKSTTMKILA GLIRPDSGEV
TIKGMTPGSK EVKRILAYLP EDPVPYRILT VRENLEYFAS LRGIPNPKEK AEEMIDLFDL
REYERIQAGK LSRGNQQKLS LALVLLHEPE IVLLDEPLNY LDIPTQERVI NILRGMNSTF
LVSTHIMSIA SRLTDHVIMI SRGKVIWAGS ISELRALGRE DEPIESVVSR MMTDDH
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