| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1230 |
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| Symbol | |
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| ID | 5103844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1206516 |
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| End bp | 1207478 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507122 |
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| Product | thermopsin |
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| Protein accession | YP_001191315 |
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| Protein GI | 146303999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCAG TACAACAATC CCCGGTGTTT TTCCCTCCAA TCCACGGCAA GCCACAAACC
CGAGGAGAGT ACGTGAACCC ATTCCTTTAC TACACATCTC CGCCAGCCCC CTCAGGAATA
GCGTCCTTCG GCCTCTATAA CAATTCAGGC AAGGTGACGC CATACGTCAT AGAGACCTCT
AAGGTGTTGG GTTACGCCAA CATTACCAGC TTACTCGCTT ACTACAAACA GGCCAGAAAA
TACGGTGTAA ATCCATACTC TGCTACCCTG CAGATGAACG TTGTGTTGCA GGTAAACACC
ACGCAGGGAA CCTTCGCGTA CTGGTTACAG GACGTCGGAA GTTTCCAGAC AAACACGAAC
CAGGTCACCT TCATTGATAA CATCTGGAAC CTTACAGGGA ACCCCTCAAC CCTCTCGTCA
TCTGCTGTGT CCGGGAACGG AAAGGTTGCC TCTGCTGGGA GTGGGAACAC CTTCTATTAC
GACGTGGGTC CAACCTTTAC CTACTCCTTC CCGTTCTCTT ACGTATATGT GGTGAACACG
TCGTATACGT CTAACTCAGT GAGTATATGG TTCGGGTATG AGATCCTACA GGGCAGTCAA
GTCACCTCGG TTCAGTACTA CGACAAGGTT ACCATATCCC AGCCAGGGAT AAAGTCCGCG
GAGATCACAA TCAACGGGAA CACGTATACG CCCGACGGTC TATACTACGA CGCAGAGTTG
GTATGGGGAG GTGGTGGAAA TGGTGCGCCA ACTCAGTTCA CCCATCTCAA CTCGTCGCTA
GGTCTTTACT ATTTGTCGAG CACCGGTGTA ACCCCGATCC CATCACTTTA CACCTTCGGT
TCCAACACAG GGGAGAGCGC ATACAACGTT CACGACAACC TGGTGAACGG TGTACCGGAG
AGTTACGTGG GGACAGAGGA GCTCACGATA CTAACCAACA ACTTCAGTGT GGTGCTCGTC
TGA
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| Protein sequence | MSAVQQSPVF FPPIHGKPQT RGEYVNPFLY YTSPPAPSGI ASFGLYNNSG KVTPYVIETS
KVLGYANITS LLAYYKQARK YGVNPYSATL QMNVVLQVNT TQGTFAYWLQ DVGSFQTNTN
QVTFIDNIWN LTGNPSTLSS SAVSGNGKVA SAGSGNTFYY DVGPTFTYSF PFSYVYVVNT
SYTSNSVSIW FGYEILQGSQ VTSVQYYDKV TISQPGIKSA EITINGNTYT PDGLYYDAEL
VWGGGGNGAP TQFTHLNSSL GLYYLSSTGV TPIPSLYTFG SNTGESAYNV HDNLVNGVPE
SYVGTEELTI LTNNFSVVLV
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