| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1206 |
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| Symbol | |
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| ID | 5104502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1179103 |
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| End bp | 1180740 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507098 |
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| Product | blue (type1) copper domain-containing protein |
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| Protein accession | YP_001191291 |
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| Protein GI | 146303975 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3794] Plastocyanin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAA TTTTCAAGAG AATTCCAAAG GCCTCACTAC TCTTTTTCCT AGTAGCAGGG
CTCTTTGGGC TTCCAATGGC TATCAGCGCA ACTACACCAA CCCCACAACA TTGGATAGTT
TACGTAGGCG GACAGGCAAT GAGTGGGAAC ACCATGATTA TGACCATGGG CTATTTTCCT
GAGATAATCA CCATTGACGT GGGAGATAGT ATCACCTTCG TTATCAACTC AACGGAGCCT
CACACCATCA CATTCCTCAG CGGAAATCCG CCCTTGAATC CCTTCTCTCC ACAGGCCCTA
GCGCCCATAG GGGGATCGGT CTATAACGGC ACGGGGATAG TATCCTCAGG CCTTCTATCT
CAAGGTCAAA ACTACACCTT AACTTTCACT AAGGCTGGAG TTTACGTATA TCAATGTCTG
ATTCATCCAG GTATGATGGG TGTGGTCATC GTTAATCCTG CGGGTACCCC ATACCCAATG
ACTCAGGCAC AGTACGATCA GTTAGCATCA CAACAAAGCT CCCAATCCCT GGCAAGCGGT
TTATCTCTAC TGCAACAGGT TAATCTACCC GCAACCCAAG GTCCTAACGG AACGGTCATC
TGGCATGTGG ACGTCGGTCA GCAGACTCCA GTTAGCACCG AAGTCACCCT TAACTCGATG
AACTCTAAGG TTAGCGGTTC TGCCATCTTG ACAATGACCG CACCAGGAGT GCTCACCGTT
CAGGTTAGTC TTACAGGTTT ACTTCCAGGA GAGACCTACA ATGTTGGTAT CTTCCAAGGA
GCAGCCGAGG CTGGAGGAAA ATCATTATAT AATCTTAACC CAGTGGTTGA AGCCTCAAAC
GGGACTGGAA GCTCTGTCAC AACTCTCACC CTTCCGCCAC TTAGCCCATT TATACCAACG
AGCTTTGGAA TACCCTCTGC CGGATGGTAT ATTAACGTCA GCAACTCTGG TAACGCCGTT
GCTGCCGGAG ATATAATTTT CCCAGTCTCT AGCGTAATGG GATTCCTTCC GAATACCCTA
ACGATACACG CAGGAGATAC TGTGGTGTGG ACAGACGTTG ATCCGGACGA AGTACATACG
GTTACATTTG TTCCACAGGG GATGCCAATT CCTGAGTTTG GAACGCCCAC AAGCCTCATA
CCTACAAAGA GCCATATATT CAATGGAACA GGTTACTATA ACTCCGGCCC CATGATAGCG
GGAGTAAGCT ACAACCTGAC CTTCGTTACT CCAGGAGTTT ATACCTATGT TTGTTTGCTA
CATGACGGCA TGGGTATGGT AGGGACAATA ATCGTGTTGC CTTCCACACC GTCATCGAAT
CCCCAAGCGA CACTTCTTAG CAAGCAGATG TCTGAACTTA ACAATACCCT AAACTCACTA
AACTCACAGG TTAGTCAAAT AGGCTCTCTA ACCTCTCAGG TGGGTCAACT CAACAGTCAA
GTAAGCTCAC TAAACTCACA GGTTAGTCAA ATAGGCTCCC TCAGCTCCCA GATATCATCC
TTGAATGGCT CCCAGGCCTC CTATGAGAAC AGCGTAAACA GCAAGATCTC CTCACTTTAC
TCACTCCTCA CGGTCCTCAT AGTTCTTGTG GTAATCTCTC TAATTCTGAA CGTTGTCCTG
ATAGCTAGAA GAAGGTAA
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| Protein sequence | MRRIFKRIPK ASLLFFLVAG LFGLPMAISA TTPTPQHWIV YVGGQAMSGN TMIMTMGYFP
EIITIDVGDS ITFVINSTEP HTITFLSGNP PLNPFSPQAL APIGGSVYNG TGIVSSGLLS
QGQNYTLTFT KAGVYVYQCL IHPGMMGVVI VNPAGTPYPM TQAQYDQLAS QQSSQSLASG
LSLLQQVNLP ATQGPNGTVI WHVDVGQQTP VSTEVTLNSM NSKVSGSAIL TMTAPGVLTV
QVSLTGLLPG ETYNVGIFQG AAEAGGKSLY NLNPVVEASN GTGSSVTTLT LPPLSPFIPT
SFGIPSAGWY INVSNSGNAV AAGDIIFPVS SVMGFLPNTL TIHAGDTVVW TDVDPDEVHT
VTFVPQGMPI PEFGTPTSLI PTKSHIFNGT GYYNSGPMIA GVSYNLTFVT PGVYTYVCLL
HDGMGMVGTI IVLPSTPSSN PQATLLSKQM SELNNTLNSL NSQVSQIGSL TSQVGQLNSQ
VSSLNSQVSQ IGSLSSQISS LNGSQASYEN SVNSKISSLY SLLTVLIVLV VISLILNVVL
IARRR
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