| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1181 |
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| Symbol | |
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| ID | 5104477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1150971 |
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| End bp | 1152443 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507073 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001191266 |
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| Protein GI | 146303950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.595766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG TGATTGCGGT GGTCGTGATT GTGATAGCAG CAATTGCTGG ATACATGATG
CTTAGCAGGC CGAGCTCCAC ACCTCAGACC CCGACGAACT CCGGTTCAGG CGGGTCATCG
AGCAACGGGA CTACGACTTC AACCTCCAGC ACTTCCAGTG GTGGAAACAC GGGTAACGCA
ACCACGCTAA ACATTATTGC CTGGTCAGGT ATATGCGGAG ATTACATTAC CGAGGCCGGT
AAGCTGTTTG AGCAACAGCA TCCGGGCGTC AAGGTTAACG TGTATACATA TCCCTTCAGC
CAATACATCA GCGTAGAGTT AACTTACCTC AAGGCCCACT CCTCCCAATT TGATATAATG
TCATACACTC CAACGTCGTC GGCCCTGATT GCCCCCTATC TAGTTCCCTT AAACCTTACG
CAGGACTTTA ACACCTCCGA CCTAATAATG CCCCAGGAGA CGTATGCGGG GATAGTCTAC
AACTACACAA CCCATCAGAA CATAACCGCA GGTATAGCTT ACGCGACCTG TGTTGACACC
CTGGTTTACA ACACCACAAT CTTTGACAAC AAGACCCTAC AGAACGAGTT CTACAACGAG
TATCACATGA ACTTCTCACC CCAAACCTGG CAGAACTGGA CCGTGGTCAT AGACGTGGAC
CAGTTCCTCA CCTCGCATCA CGTGACCAAG TACGGAATCC TGTTACCTGA CGACACCTCC
CACAACATAT GGAACTCCTA CCTGGTGATC TTTGGATACT ACTACGCGAG GAACTCGAGC
CTAAATGACG GACTCATCTC AGGCCTTCCT GAGTTTCAGG TATACTTCCA GGGTAAGATC
CTTCCCGGCT ACAACTTCCC ATTACCCTCC ATTAACTCCA CCGCCGGTGT TCAGGCCCTT
GAGGTGTATA AGCAACTAGT CTCCTACATG ATTCCGCCAT CTCAGGTTCA GATAACCTAC
GACAACATCA TCAACTACCT TCCTCAATCC CCAGGTATGA TATCGTGGCC AGGACCCCTC
GGAGGCCTGA ATCAGAGCCA GTTGGAGCAA CTTGCATACG CCCCCTTACC AGGTGGTTAC
GCCGTTGCCG GTTCTGACTT TGTGGGAATA AGCAAGTACT CTCAGCATCA GCAGTTGGCC
CTAGAATTCC TGCAGTTCCT GGTCTCGCCA CAGGTTCAGG CGAAGCTCTT CTACATGTAC
GAGATATTCC CAATCTCTAA GGAGGCCTAC AATATCCTGT TGTCTAACAC GTCTCTCCCC
TCATATGAGA GGCAGTGGTT AACAGTGATG CCCACCATAG CCGAGGAGGG ATGGGACGTC
GGACCCATCA TTCCTCCGAC ATACGAGCAA CTCCTTCCCA CCTTCAATAA CGAGGTCCTA
CTCTACCTAG AGGGTCAGGT GAACAACCCA CAGCAGGTCC TGAACACCAT AGCCTCGCAG
TGGATGCAGT ATCTCAAGTC CTACTATGGT TAG
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| Protein sequence | MIAVIAVVVI VIAAIAGYMM LSRPSSTPQT PTNSGSGGSS SNGTTTSTSS TSSGGNTGNA
TTLNIIAWSG ICGDYITEAG KLFEQQHPGV KVNVYTYPFS QYISVELTYL KAHSSQFDIM
SYTPTSSALI APYLVPLNLT QDFNTSDLIM PQETYAGIVY NYTTHQNITA GIAYATCVDT
LVYNTTIFDN KTLQNEFYNE YHMNFSPQTW QNWTVVIDVD QFLTSHHVTK YGILLPDDTS
HNIWNSYLVI FGYYYARNSS LNDGLISGLP EFQVYFQGKI LPGYNFPLPS INSTAGVQAL
EVYKQLVSYM IPPSQVQITY DNIINYLPQS PGMISWPGPL GGLNQSQLEQ LAYAPLPGGY
AVAGSDFVGI SKYSQHQQLA LEFLQFLVSP QVQAKLFYMY EIFPISKEAY NILLSNTSLP
SYERQWLTVM PTIAEEGWDV GPIIPPTYEQ LLPTFNNEVL LYLEGQVNNP QQVLNTIASQ
WMQYLKSYYG
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