| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1180 |
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| Symbol | |
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| ID | 5104476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1150023 |
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| End bp | 1150961 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507072 |
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| Product | ABC transporter related |
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| Protein accession | YP_001191265 |
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| Protein GI | 146303949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.584734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTTG AGCTGAGGCA GGTCTCAAAG AGGTACGGTA AGGTACAGGC AGTAAAGGGA
GTTAACCTGA AGGTAGAAAA GGGAGAGTTT TTTGTCCTTC TCGGAACATC AGGTTCCGGA
AAAACAACTA TTTTACGTTC CATTGCTGGA CTTGAGAGAA TCGATGAGGG GGAAATCCTC
ATAGATAACG AGAGGGTTCA CCACCTACCT CCTGGGAGGA GGAACGTAGC CATGGTTTTC
CAAAATTTCG CTTTATATCC GCATAAGACT GTGTATGAGA ATCTGTCCCA ACCTATCGAA
AATCTAGATA AAGGAGAAAG AGATGAGAGA ATAAATGAAA TTTCCAAGAG ACTTGACATT
CACCACCTCC TTGAAAGGTA TCCGGCTGAG CTCTCGGGAG GACAACAGCA GAGGGTTGCC
CTAGCTAGGG CGCTGGTGAA GAGGCCTAAG GTCTTTCTCA TGGACGAACC CCTCTCCAAC
ATTGACGTCC CCAAGAGGGT AGCAGCTAGG GATCTCATCA AGGAGATCCA GAGGGAGGAA
TCAATTACCA CGATCTACGT GACCCACGAT CAGACGGAGG CCATGGCTCT CGCCGACAGG
ATAGGGGTTA TGCTCAACGG GGAGCTCCGC CAGGTCGGCC ACCCAGAGGA CATTTACCTC
AATCCCAACT GCGTGGATGT AGCAACCTTC TTTGGGATGT CAGTGGTTGA CGGAGGCCTC
GTCAAGGAGA GCGGAAAGGT TGGTGTCCTT CCAGAGCACG TGGACCTAGG TAAAGGTCCG
TATAAGGGCG TGGTTAGGAA CGTTGAGTTT GCAGGAAACT CCTACATGGT TCACCTCTCC
GTAAATGGGG ACAAGTTGAG GGCACTGTCC AAGGTGAGAC CTAGAATTGG TGAGGAAGTG
GAGTTCGCAA TCACTAGGTA TAAGGTCCTG GGGAGTTAG
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| Protein sequence | MSVELRQVSK RYGKVQAVKG VNLKVEKGEF FVLLGTSGSG KTTILRSIAG LERIDEGEIL
IDNERVHHLP PGRRNVAMVF QNFALYPHKT VYENLSQPIE NLDKGERDER INEISKRLDI
HHLLERYPAE LSGGQQQRVA LARALVKRPK VFLMDEPLSN IDVPKRVAAR DLIKEIQREE
SITTIYVTHD QTEAMALADR IGVMLNGELR QVGHPEDIYL NPNCVDVATF FGMSVVDGGL
VKESGKVGVL PEHVDLGKGP YKGVVRNVEF AGNSYMVHLS VNGDKLRALS KVRPRIGEEV
EFAITRYKVL GS
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