| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1149 |
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| Symbol | |
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| ID | 5103497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1094398 |
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| End bp | 1094658 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507041 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_001191234 |
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| Protein GI | 146303918 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.399869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAGTCC TAGTCGTCTA CGACGTCTCT GACAACGGGA AGAGGACAAG ACTGGCCAAC
GAACTCAAGA GATATGGCCT GAGCAGGATA CAGAGGAGTG CCTTTCAGGG CAACCTCGAC
TCCCAGAGGA TGAAGAACAT GGTAAGGTCA ATTGCCCACC TGATTGATCC GAGCACCGAC
ATAATCCACG TGATCCCCAT GGGACTAAGG GATTGGGAGG AGAGGATAGT CATAGGGAAG
GAAGGGGGTG AGATCGCTTG A
|
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| Protein sequence | MRVLVVYDVS DNGKRTRLAN ELKRYGLSRI QRSAFQGNLD SQRMKNMVRS IAHLIDPSTD
IIHVIPMGLR DWEERIVIGK EGGEIA
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