| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1124 |
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| Symbol | |
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| ID | 5103596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1053649 |
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| End bp | 1054809 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507017 |
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| Product | D-galactarate dehydratase/Altronate hydrolase domain-containing protein |
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| Protein accession | YP_001191210 |
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| Protein GI | 146303894 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAA TCAAGGGTTA CATAAGGGAG AATGGAGCTG TTGGCGTAAG GAATCACGTC
CTGGTTCTTC CCTTGGATGA CCTTTCCAAT TCCGCAGCCT TGGGGGTTTC CAAGATAGTT
AACGGTGTCG TGGCTGTTCC TCACCCCTAC GGTAGGTTAC AGTTTGGTAG AGATCTTGAC
CTCCTATTTC ACATCCTTTC AGGGACCGGG GCGAACCCAA ACGTCGCTGG GGTCATCGTA
ATAGGGATTG AGGACAATTG GGCCAATAGG GTGGCAGACG GTATCGCCAA GACAGGTAAA
CCCGTTGAGG TCTTCCCCAT TGAGGGATAC GGTGACCTAA AGACCATTGA GAGGGCCTCA
AGGAAGGCCA AGGAGATGGT TCAGGAGGCA AGCGAGAAAC AGCGCACAGA GGTGGACATT
TCTTCCATTG TTATGAGCGT TAAGTGCGGG GAATCTGACA CTACCTCGGG TTTAGCATCT
AACCCCTCCG TCGGGGTCGT GGTGGATAAG ATGGTTGACC TGGGAGCAGT TGCCATGTTT
GGCGAAACCT CAGAGCTTAC GGGTGCAGAG GACATCGTAG CTGACAAGAT GGCCAACGAA
GCCTTAAGGG AAAAGTTCCT GAAGATCTAT AGGGAGTACA TTGACGTGAT AGAAAGGGAA
GGTGCGGATC TCCTTGGATC CCAGCCCACC CAAGGAAACA TTAAGGGAGG ACTCTCCACG
ATAGAGGAGA AAGCGCTAGG GAACATTCAA AAGCTCGGAC ATAGGAAGGT TAACTGCGTC
CTTGATTACC TAGATCCTCT GGTTAGGGAG AAGCAAGGTA CCCTATGTTT CGTGAACACC
TCATCAGCGG CTGCCGAGGC GGTGACGTTG TTCGCCGCTA AGGGATCAGT GCTCCACCTG
TTCACCACGG GTCAAGGAAA TATTGTGGGT CACCCCTTAA TACCTGTGAT AAAGATAACT
GGCAATCCCA AGACGGCTAG AACCATGAGT GAGCATATAG ATGTGGACGT TTCGGATCTG
CTAGACCTCA AGATCTCGCT AGAGGAGGCT GGAGAGAGGG TGTTCAATTA CATGCTTAGG
GTCATGAACG GAAGGTTAAC TGCCGCCGAG GTACTTCACC ATGAGGAGTT CTCGCCGATA
AAACTATACA TAAGTGCATA A
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| Protein sequence | MMTIKGYIRE NGAVGVRNHV LVLPLDDLSN SAALGVSKIV NGVVAVPHPY GRLQFGRDLD
LLFHILSGTG ANPNVAGVIV IGIEDNWANR VADGIAKTGK PVEVFPIEGY GDLKTIERAS
RKAKEMVQEA SEKQRTEVDI SSIVMSVKCG ESDTTSGLAS NPSVGVVVDK MVDLGAVAMF
GETSELTGAE DIVADKMANE ALREKFLKIY REYIDVIERE GADLLGSQPT QGNIKGGLST
IEEKALGNIQ KLGHRKVNCV LDYLDPLVRE KQGTLCFVNT SSAAAEAVTL FAAKGSVLHL
FTTGQGNIVG HPLIPVIKIT GNPKTARTMS EHIDVDVSDL LDLKISLEEA GERVFNYMLR
VMNGRLTAAE VLHHEEFSPI KLYISA
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