| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1121 |
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| Symbol | |
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| ID | 5104154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1050494 |
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| End bp | 1051966 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640507014 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001191207 |
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| Protein GI | 146303891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0833] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0304101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGACA AACCTTTCAA ATTGGCGAAG GTAATAGGAC CCGTGGCCAT AATAGCCTCG
GCAGTAAGTC AAGAATACGG AGCTGGTATC AACGCGGTAG CCACACAGAG TATTGGATCA
TATCCTGCCA TACTCAACCT TGTTCCAGCA ATCATGTTCA TAACTGGATT GCTCATGCTT
CCCAAGGTAT TCATGTATCA GAAGTTTGGC AAGGTGGCAA GCAGAAGCGG AGGACAATAC
GTCTGGATAT CTAGAACTAC CACTCCGGAG GTGGGATTTA TTGTTCACTT TCTATACTGG
ATTGGAATAG TATCTGCCAT AGGGTTCATT AGCTACACTG TTGGATCTAC CCTAGCTTCA
ACACTCGTGT CATTGGGGAT ATCCTCTGGG GCGTGGTTCG CTACATTTAC AGGGCATATT
GTGCTGGGGT TGGCCCTAAT ATGGTCCTTC TTCTTAATTC ATTACACGGG CGTGAGAAGC
TATGGAGTTG TGGTAACTCT GCTGTTTGCC CTCGTTTTGC TAGGGGCAAT CATATCAATG
GTTGCGGGTT TCGGCACCGC TAATTCTGTC TACACTGGTT ATTTATCGAG TCAAATATTT
CATGGAACGA TTCCCAGTTA CACTACACCT CCCCTAACTT ACTCGGATAT TTTCGGTACA
GTAACCCTGT TCATTTTTGC GTATGCGGGC ATAAGCGCGG CCCCTCTCCT AGGTGGAGAG
GCTAAGGATC CCAAAAAGGA CATGCCAAGG GGTATATTCC TAGCGTGGTT GATTGCGTTA
GTCCTGTTTA CCTTAGTTTC GCTTGCAGTC TTCCACGCAA TAACTGGAGG GCAAGTGTTT
GCGTTAATAA AATCAAAGTA TTCCTATTAC GCTACCATTC CTGGCATACT GAGCATATCT
GAACCGAAAC TTATCGGAGC TATATTCTCA ATCATAGTTA CAATTATTAT AATGAAGACA
ATCATGCCCC AGTTACTTAC CTCCAGTAGA ACGCTCTTTG CCTGGGGCCA AGACAAGATA
CTTCCTGAGG TCTTCACTCA CACTAACAAG TTTAAGGCAC CCGACTTCTC CCTGCTGGTA
TGCGCGCTAT TTGCATCAAT ATACCTAGTT TATACAACTA GCGTGGGTGT GTCCGCTGTG
GACGTAAGAT CCCTCTCTGT CCTACTTGAG ATGATGGCTC TCGGGGCAGG GGTACTTCTT
ATCTCGACCA AGAGTAGCAA GAAAGAATGG GAAAAGGAAG TGACGACAAT AGGTGCGATC
ATAGCAGGGT TAGCAGGTAT AATAGTCACG CTTATTATTA TTCCAAGCGT CGCCGTTGTA
CCCCACGTTT CAATTCTCCT TCAACCCTCG TTTCAAGTGA TATTGGTTAT AGTGATAGGT
TTCCTCATCT ATGAAATCGC AAAAATGTAT AACAAACGGA CTAAAAACAT CGATCTAAAT
GATCTAATAA AGAAAGAGCT ACCCCTGGAA TGA
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| Protein sequence | MSDKPFKLAK VIGPVAIIAS AVSQEYGAGI NAVATQSIGS YPAILNLVPA IMFITGLLML
PKVFMYQKFG KVASRSGGQY VWISRTTTPE VGFIVHFLYW IGIVSAIGFI SYTVGSTLAS
TLVSLGISSG AWFATFTGHI VLGLALIWSF FLIHYTGVRS YGVVVTLLFA LVLLGAIISM
VAGFGTANSV YTGYLSSQIF HGTIPSYTTP PLTYSDIFGT VTLFIFAYAG ISAAPLLGGE
AKDPKKDMPR GIFLAWLIAL VLFTLVSLAV FHAITGGQVF ALIKSKYSYY ATIPGILSIS
EPKLIGAIFS IIVTIIIMKT IMPQLLTSSR TLFAWGQDKI LPEVFTHTNK FKAPDFSLLV
CALFASIYLV YTTSVGVSAV DVRSLSVLLE MMALGAGVLL ISTKSSKKEW EKEVTTIGAI
IAGLAGIIVT LIIIPSVAVV PHVSILLQPS FQVILVIVIG FLIYEIAKMY NKRTKNIDLN
DLIKKELPLE
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