| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1117 |
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| Symbol | |
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| ID | 5103590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1044353 |
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| End bp | 1045738 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640507011 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191204 |
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| Protein GI | 146303888 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.316307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATCA AGAGTAATCC AGACAAGGAT AGTGAAGGAG TAAAAAAGAC TCATAACCCA
TTTGATGCAT TGGATAATAT TCGCTCCAAT AGAAAGATAT TTTTCATTCT ATTGGTAGCT
GGAATAGGAG CATTTGCCGA TTATTATAAC ACTGCGGGGA TATTGACACC GTCCAGCTTG
AGTTATTTAA AGTATTTCTC TGTGACGACG TCAGTCTATG GCCAATTCGT GTTCTTTCTT
AATATAGGTA TATTGATAGA CGCAATAACT TGGGGACCAC TGGTGGACCT CCTAGGCAGA
GCTAGAATGT TCTTCGTGGA TTTGGTTGTT ATGCTTGTCT TTGCGACCTT GTCCATATTT
GCCACTAACT TCCACGAGTT TGAGCTATTC AGGATACTAA CAGGTTTTGC AATAGGGGGC
GATTACGGCG CCGCACTGCC GTTTCTGTCT GAGTTTGCGC CAAAGGCAAT TAGGGGAAGA
ATATTGGCGC TGTTTTGGGT ACTGGCGCAA AGCGGACTTG TGGTCGGAAC ACTGGTGAGC
TACTACTTTT TGTCAATATC GTCGATCTCA CCAGAAATCT GGAAAATTAT ATTCGTGACA
GGCTTGATAC CCATCATTAT CGGAGCAGGA TTAAGGTTTA CTGTCCCAGA GTCTGCTAGA
TGGCTTCTAT TCAAGGGAAA AACTGATAAG GCAGTTGAGG CGGTAAGGAA GGTCACGGGG
AGTTCACCCC AAGAGACGGT AAATAATATC ACTAGTTCAT TCAATATTCG TAAAAATATA
CCTCTGTTAC TTCTCCTCAT TGTCCCAACG TTTATTGGGA TATATGCTAC CGCTATGCCC
GCAGGACTAT CCACCTATTT CTTCCCTTAC ATCACGCAGA GTTTGGGATT GTCTAAGCTT
ACTTCAGTGC TGTTGCAAGT CCCAGTTGTC TGGGTATCAG AAATCGTATT TACTTTAATT
TTAGCTCTTA TTACAGATAA AATTGGTAGA TTAAATTCAC TGATAATAGG AGGTACTGTA
TTAATAATTT CTACGTTACT GATAATTCCG CTAACGCATA ATGTGGATGC CCTACTTCCC
TTGATATTCA TCTCCAATGG GAGTAGCGTA TTTTCTCAGA CAATCATTAT AAATTGGGGT
GCAGAGCTAT ATCCTACAAA CATGAGAGGT ATAGCATCTG GAATTAACAT AATGGCATTT
AGGCTATCCC TGGCGTCAAC AGGGTTCATT GAACCTGTGC TGTTATCATT AGGTGGTGTT
CCGGCTCTAT ACGCTTTCCT AGGATTATTA TCTCTTATTG GAGTTATGAC CGTAATGATA
TTGGTTGGTA AGAGGGGTTC GGTGGAAGGA AAGTCGTTAG AAGAAATAAC TGATAGATTT
AGATAA
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| Protein sequence | MVIKSNPDKD SEGVKKTHNP FDALDNIRSN RKIFFILLVA GIGAFADYYN TAGILTPSSL
SYLKYFSVTT SVYGQFVFFL NIGILIDAIT WGPLVDLLGR ARMFFVDLVV MLVFATLSIF
ATNFHEFELF RILTGFAIGG DYGAALPFLS EFAPKAIRGR ILALFWVLAQ SGLVVGTLVS
YYFLSISSIS PEIWKIIFVT GLIPIIIGAG LRFTVPESAR WLLFKGKTDK AVEAVRKVTG
SSPQETVNNI TSSFNIRKNI PLLLLLIVPT FIGIYATAMP AGLSTYFFPY ITQSLGLSKL
TSVLLQVPVV WVSEIVFTLI LALITDKIGR LNSLIIGGTV LIISTLLIIP LTHNVDALLP
LIFISNGSSV FSQTIIINWG AELYPTNMRG IASGINIMAF RLSLASTGFI EPVLLSLGGV
PALYAFLGLL SLIGVMTVMI LVGKRGSVEG KSLEEITDRF R
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