Gene Msed_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1093 
Symbol 
ID5103567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1019532 
End bp1019945 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content47% 
IMG OID640506988 
Producthypothetical protein 
Protein accessionYP_001191181 
Protein GI146303865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAC CACTCGAACT TTCGCGTTAC TTAGACAGGT TGAGGGCCTT CAAATGGAGG 
GACTTTGACG TATACTACGC AATCCTCTTT GGGTCACTGG CCAAGCGCGG TCGGGGAAAC
GACATTGATA TAGCTGTAGA GTTTAAGAGG AAGAGTCTGG ACGCGTATTC CTCTCTCCTC
GCATCCCTAA GGAATTATCT AGATGAGGAT AGGGTGGATT TAGTCATGAT ATCAGACAAT
TCCGATTGCT TCCTTGTTCA TGAGGTCTTC AGCGACTCAC TGATCCTATA CATGGAAGAT
TATGATAGAA TGCATAGGAT AGCGTCAATC TGCGAGGACT TCCTCATAGA TCTAAAGAAG
TTACAGATAC TGGAAAACGC TGGGAGGGCG ATCATGAGGC GATGGCAGTC CTAG
 
Protein sequence
MPEPLELSRY LDRLRAFKWR DFDVYYAILF GSLAKRGRGN DIDIAVEFKR KSLDAYSSLL 
ASLRNYLDED RVDLVMISDN SDCFLVHEVF SDSLILYMED YDRMHRIASI CEDFLIDLKK
LQILENAGRA IMRRWQS