| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1081 |
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| Symbol | |
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| ID | 5104462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1008839 |
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| End bp | 1009999 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506976 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001191169 |
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| Protein GI | 146303853 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATATAA CCCTAGTTCT CCTGGAGATC TCAATACTCA TCTTCTTTGC TGAGCTCATG
AGAACATCTC TTCGAAAGTT CGTTCCCTCC ATTGTTGGCG AGATCATAGC GGGAATGGTG
TTAAGTCCCT TCGCTGTGGG AGGTCTACTG GATCACATCC TCAACCTAGA TCTGTTCTCC
CTGAACCAAT ATCTCCTTTT CCTATCCGAG TTTTCCATGA TCCTCCTGAT CTTCTCCTCC
GGACTGGAGC ATGGAGTCTC AGCGATCAGG TCAGCGGGAA CGTTTGGATT CCTGGGGGCA
ACGGCAGGTG CACTTTTTCC CGCCCTAGTG GGGATACTGG TCTTTCAGGG AATAGGGTTT
GACACGTCGC TCATCCTGGG AACTGCCATA GGTGCCACAA GCTTAGCCTC TGCTGGTTCT
ATCATTTCTG AACTTAGGTT GAAAGGCAAA GGGGTTGATC TACTCATGTC CATGGCGTCA
TCTGATGACG TTGTGGACCT AATCTTGCTC TCAGTGGTGC TGGGAACCCT GGCTGGGGCA
ACATCTGTCA AGTCCATAGC GACGCTGGTG ATCTATTATA TAGTCGCCTG GATTGTGATA
TTCGTGGTTG CCGTGAGGGT TATTCCCATG ATCGCTAACA GGTTGGACGA GGTATACATT
GAGGAGTTCT CCATGTTAGT TATATTTGGG TTAACGGCCA TCATGACTGC CCTGAACTTC
TCCCCCGTAA TTTCAGCATT CATTGCAGGA GTGGCCATGG CTGAGAGCGT GAAAAAGGAG
AGGGTTAGGC AAATAATCGA CGTTCTTCTG GCGGTGTTCG GAAGTGCCTT CTTCGTAGTA
GTGGGACTCC AGGTTAATCT GTCAGGTCTC ACCAATTTCT GGTTAATGGC AGTGGAGCTC
ACTGTGATTG CTGTGATTTT CAAGATATTG GGAGTTTTAC CCTTTGCCTA CCTGGGATTG
AGGAAGTGGA GAAGCGCGTT AGCCGTCTCC CTTGCCATGG TTCCGAGGGG TGAGACTGGA
CTGGTTGTGG GATCCATAGG ACTAAGCTAT AACGCGCTCA ATCAGAACGA GTTCGGTGCC
CTAGTTTTCA TGGCAATCCT AACCACTGTA ATTGGCGCCT CATTTTTCAA GGGTATGGCC
CATTGGTTGA GGGAGGAATA G
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| Protein sequence | MDITLVLLEI SILIFFAELM RTSLRKFVPS IVGEIIAGMV LSPFAVGGLL DHILNLDLFS
LNQYLLFLSE FSMILLIFSS GLEHGVSAIR SAGTFGFLGA TAGALFPALV GILVFQGIGF
DTSLILGTAI GATSLASAGS IISELRLKGK GVDLLMSMAS SDDVVDLILL SVVLGTLAGA
TSVKSIATLV IYYIVAWIVI FVVAVRVIPM IANRLDEVYI EEFSMLVIFG LTAIMTALNF
SPVISAFIAG VAMAESVKKE RVRQIIDVLL AVFGSAFFVV VGLQVNLSGL TNFWLMAVEL
TVIAVIFKIL GVLPFAYLGL RKWRSALAVS LAMVPRGETG LVVGSIGLSY NALNQNEFGA
LVFMAILTTV IGASFFKGMA HWLREE
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