| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1055 |
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| Symbol | |
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| ID | 5104437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 984004 |
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| End bp | 985305 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506951 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191144 |
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| Protein GI | 146303828 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.367509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGATG ATAAGGGAAT AATAGGTAAG GTAATTCTAG CTAGCTCTCT GGGTACGGTA
ATAGATTACT ACGACCTTTT CATAGTTTCC ACAGCTGCAT CGTTAGTGTG GCCATCCATA
TTCTTCACTG GACTTAGCGC CGCACTCAAG GCCAGTTTAA CCCTAATCAC TTTTGGTATT
ACCTACATTA CTAGACCAGT GGGAGCGTTC ATTTTTGGAC ATTTTGGAGA TAAAATAGGT
AGAAGAGACA TGCTGGTATG GACACTTGGG CTTACCGCAC TAGGTGTGGG AGGCATTGCG
GTGCTACCTG AATCCAAAGT GATTGGTACT TCCTTAGCTG TTTCCATGCT CGTCCTTTTC
AGGATGATAC AGGGAATTGG TCTGGGTGGG GAGTGGGCTG GGGCCTCCTC ATTTTCCATT
GAATTCCTAT CTCACTCAAG GCACAGGGCG TTCCTTACAG GATGGATACA GAACGGAGTA
AATATAGGTG TTCTCCTGGC ATCCCTTGCC TTTACTACTG TGGCTTCAAT CTTCAACAAA
ACAGAGCTGT TAAACTTCGC GTGGAGGATA CCATTCGCGA TAGGTCTAGC TATCCTAGTC
CTTGCAATAG TTATAAGATT AAAAATCATG GAATCACCAC TATTTCAAGA ATTGAAACAA
AGAAATCAAG TGGAAAAGCA ACCGATCTTG ACGGCACTCA AAGAAAAGTG GAAACTAATT
CTCCTACTCC TACCTACGGC ATTCTTTATT GTGGGTGCTC CTGGGCTATT TGTGAGCGGA
CCTTACATCC TTGACTTCGT GGTGGCCAAA ACACATGCCA TTCCTGCTGC GTCTCTGTCC
CTTGCGGTAT CCTACGCAGC GGGTGGAGGA ATATTTGCAA CTATCCTAGG TTCCCTATTG
GGAGACAAGA TAGGTAGGAA AACTACAATG ATAATTTCCT CAGTATTGGT GGCAATTTTC
CTTTATCCTT TCTACCTCAT GGTAGGAACT CTGAGTTATC CGCTAATTGT TGCTGGACTT
GTCCTGATAA ATGCGCTGTA TAAGTTGGGA GATGGGGTAA CGCCGGCTCT ATTTTCAGAG
CTATTTCCAA CGAAGTACAG GTATTCTGGA TCCGGAATTG CATATCAATT GGGAAGTCTG
GTATTGGGAC TAGTGTCCGT TTTAGTGATT CCCTTACTCA TAGGTGGAAA AGGGATAGTA
GTATCATTAC CGTATATAAT CGACTTCGGG ATAGCTACTG CCATTCTCAC TGCGATCACC
ATATATTTTG CCAAGGAAAC AGTGAAAACC GAGGTCGCCT AA
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| Protein sequence | MGDDKGIIGK VILASSLGTV IDYYDLFIVS TAASLVWPSI FFTGLSAALK ASLTLITFGI
TYITRPVGAF IFGHFGDKIG RRDMLVWTLG LTALGVGGIA VLPESKVIGT SLAVSMLVLF
RMIQGIGLGG EWAGASSFSI EFLSHSRHRA FLTGWIQNGV NIGVLLASLA FTTVASIFNK
TELLNFAWRI PFAIGLAILV LAIVIRLKIM ESPLFQELKQ RNQVEKQPIL TALKEKWKLI
LLLLPTAFFI VGAPGLFVSG PYILDFVVAK THAIPAASLS LAVSYAAGGG IFATILGSLL
GDKIGRKTTM IISSVLVAIF LYPFYLMVGT LSYPLIVAGL VLINALYKLG DGVTPALFSE
LFPTKYRYSG SGIAYQLGSL VLGLVSVLVI PLLIGGKGIV VSLPYIIDFG IATAILTAIT
IYFAKETVKT EVA
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