| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1033 |
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| Symbol | |
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| ID | 5104333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 956433 |
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| End bp | 957971 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640506929 |
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| Product | ABC transporter related |
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| Protein accession | YP_001191122 |
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| Protein GI | 146303806 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.264472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTGTAA GGATAAGGGA CCTTAAGGTA ACTTATCTGG GAAGAGGAAG GCCCTCCCTT
CAGGTGGACA GCCTGGATAT CAAGGAGGGG GAGTCGGTCC TAGTACTCGG CAAGTCCGGT
TCAGGGAAGT CTACCCTGGT GAGCTCCTTG AATGGTGTGA TCCCCAACCT AATCTCGGCC
AAGGTTGAGG GAGAGATCAC GGTTTTCGGG AGGGACCCCA GGAAGACACC TGTTCACGAA
ATGGCCAAGC TAGTGGGAAC CCTCCTGCAG GACCCTGAGG CTCAGGTTTT CCATCACCTG
GTTCGAGACG AGATCGCCTT CGGACCGGAG AACTTTGCCC TTCCTAGAGA GGAGATCCTG
TCACGGGTTG AGGAGTCCGC AAGGGTCACA GGGGTCTCCC ACCTCATGAT GAGGGAGACA
TCCTCACTGT CCGGGGGTGA ACTTCAGAGG ACTGTGCTTG CCTCCGTCTT AGCCTTGAGG
CCTAGGGCGC TCATCCTTGA TGAGCCCACG TCCAGCATTG ACCCCCAAGG GACAGCGGAG
ATCCTGGGTC TCCTGAGGTC GCTAAGGAAC TCCGGCGTGA GCATGATAAT TGTGGAGCAT
AAGGTTGAGA GGGTTCTGCC TTACGTGGAT AGGGTTATCC TAGTGGATGG AGGAAGGGTT
GCCCTGAACG TCGAGAAGGC CAGATTAATG GAGCACGTCG ACCTGTTAAC CAGGGCAGGG
GTTGAGGTAC CCGAGTATTA CCTTCATATG AAAAGGTACG GCGTAACTCG GGATTCCCTC
TCGACGTATA GGCGAAGTCC GATCCCCAGG GTGAGGGGTG GGAGCATCTC ACTCTTCGCG
AGGGTTAAGG TTTGGACTAA GGAAGGAAAG GTCCTAGTCG ACACCGAGAT TCAACTGAGG
AAGGGCGAGA TAGTTGCCCT CATGGGAAGG AATGGGGCAG GGAAGACGAC TCTCCTGAAG
GCGATCATGG GCCTTCTGGA CACCAAGTTG AGGAGCGAGG TTCACCTGGT CGTGAGTGGG
AAGGACATCT CCAGGTCTAG GTATTACGAG AGGGGAAGTT ACGTCGCATA TTTACCTCAA
AACTTCGACG TAATGTTTGT CAGGAGAACT GTGGAGGACG AGATTAAGGC CTCCTCCAAC
GATCCAGAGC AATACCTCAA GTTATTCTCG TTGAACCAAG TAAGGAAAGA GGATCCCTTA
ACCCTATCCT TTGGTCAGAG GAGGAGAGTA GCCATGGCCT CTATCCTCGG AAGGGGGCAG
AGGGTGGTCC TGATGGATGA GCCCACGAGT GGACAGGATT GGTATCATAG GGAGAACCTG
GGGAAAGAGT TGAGGGAACT GGGGAAGAGG GGAATATCAA CGCTCGTGGT CACACACGAT
TCAAGGTTCG TAGACAAGTT CTGCGATAGG GTGATCGTGA TGGACCAGGG AAGAATCGTG
ACTGAGGGAA CGCCAGAGGA GGTGTTCAGA GTGGGGATCG TGACTCCGCC CACTGAGTAC
CTGGTTGAAG CTGGAACCTG GAATCCGCTG GAGGGATAA
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| Protein sequence | MFVRIRDLKV TYLGRGRPSL QVDSLDIKEG ESVLVLGKSG SGKSTLVSSL NGVIPNLISA
KVEGEITVFG RDPRKTPVHE MAKLVGTLLQ DPEAQVFHHL VRDEIAFGPE NFALPREEIL
SRVEESARVT GVSHLMMRET SSLSGGELQR TVLASVLALR PRALILDEPT SSIDPQGTAE
ILGLLRSLRN SGVSMIIVEH KVERVLPYVD RVILVDGGRV ALNVEKARLM EHVDLLTRAG
VEVPEYYLHM KRYGVTRDSL STYRRSPIPR VRGGSISLFA RVKVWTKEGK VLVDTEIQLR
KGEIVALMGR NGAGKTTLLK AIMGLLDTKL RSEVHLVVSG KDISRSRYYE RGSYVAYLPQ
NFDVMFVRRT VEDEIKASSN DPEQYLKLFS LNQVRKEDPL TLSFGQRRRV AMASILGRGQ
RVVLMDEPTS GQDWYHRENL GKELRELGKR GISTLVVTHD SRFVDKFCDR VIVMDQGRIV
TEGTPEEVFR VGIVTPPTEY LVEAGTWNPL EG
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