Gene Msed_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0994 
Symbol 
ID5104543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp917788 
End bp918228 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content49% 
IMG OID640506893 
Productflavin reductase domain-containing protein 
Protein accessionYP_001191086 
Protein GI146303770 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00571546 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGGT ATCCACAGGG CGTAGCCGTG GTTACCACTA CGTGGAAGGG TAAAATGGTC 
GGAATGACAG TGAACACGTT CAACTCGCTT TCCTTGAACC CTCCCCTGGT CCTCTTCATT
GCCGATAGAA CCAAGGGTAA CGACGTCCCA TTCAGGGAGA CTTCAAGTTT CTCGGTAAAC
CTTGTGGACG ATGCGAAGAT CCTCGATGTT TTTGCAACCA AGCCAGTGGA GACCAGGTTT
CAGGAAGTGA AGTTTCATCT CTCAAAGGAA GGGGTTCCTC TCCTGAGCGA TGGTTATGCC
TACTTACTAG CAAGTAGGAG CCAGGTGATA GATGTGGGGG ATCACGCTAT CATAGTGGGG
GAGGTGAAGG AGGTTAAGGT GAACAGGGAA CCCAATCCGC TGGTTTACTA CATGAGAAAT
TACAGGAACG TTTGTATTTA A
 
Protein sequence
MRRYPQGVAV VTTTWKGKMV GMTVNTFNSL SLNPPLVLFI ADRTKGNDVP FRETSSFSVN 
LVDDAKILDV FATKPVETRF QEVKFHLSKE GVPLLSDGYA YLLASRSQVI DVGDHAIIVG
EVKEVKVNRE PNPLVYYMRN YRNVCI