| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0945 |
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| Symbol | |
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| ID | 5104375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 871735 |
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| End bp | 873972 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506848 |
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| Product | Ni Fe-hydrogenase I large subunit-like protein |
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| Protein accession | YP_001191041 |
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| Protein GI | 146303725 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTA GTTCACCATA TTATTTCACG TTTGATTGGA CTAAACCAGT TCTCATAGAA
CCCATAGTGA GGATAAAGCC TGAGTTGGGA ATACAAGTCA CCTACGACTC CTCTAGTAAC
AGGGTTACGG ACGCCTATGC AGCAGCAGGT ATGTTCAGAG GTTTCGAGAT ATTCATGAGA
AATAAGCCAG GACCAGACGT CATAATGCTT TCCAGTAGGG AGTGTGGAAT ATGTGGAGAA
CATCACCAAT TCATTGAAAG AATTGCACAG GAAATGGCTC AGGGCGGTAA CGCTCCTCCA
CCATTAGGTC TTGAAACCAT TATCCTGGCT AATGACGCAG CTATGACCTA CGATGCCACA
GCCCATCTTA CAGCTTTAGG AGGACCAGAC TGGAGCTCCC TATTCTTCAA GGTTGCTGGG
TATTTCCCAA GCCAAATTTA CGAAATAGCT CAGCAGACAC CTCTGAGTAA AGTGGCGCAA
GAGTCTCAGG CATTCCCAAT GGGCGCACCA ACGCAACTGG AAATGGCCGG CGTCAAATTG
AAGACTGTTT CGGATCTCAT GGATGCGTTA GTTCCAATAA TTGGCGCCTA CTTCCTTGAG
GGAGCCTATT CGTGGAGAAT ACTTCACGAG GCTGAATTGC TGTACTATCT CAGAGTACCT
CATCCGATAA CAATGGTACC TGGAGGAATT GGTGTACCTG CCACTGTGGA GAACCTACAA
AGATATTTCC AACGGATGGT TGACGGAACG GCTTGGTTAA TGAAACAGAT GGCCGTCTAT
GAATATTTGA CATTATTCCT TGCAGATTAT AATAATACGT TCGGAATCCA GGCTCTATAT
GACAAATTGA ATGGGACTCT TGGATTTGCT GAGGAGGGAA ACAGACCTGG AAACTTCGTC
TCCTATGGCC AGAGCGACGT TTCAGAAGCT CCCTCAGTTA CGCCATCCAG TACATCGGTG
ATGCCTTATG ATGGTACCTA TGAGAATATG GGCGCTTGGG GTAGGGCTAG GGTCGTGAAA
CCAGGACTGG TTATTCAACC CAATTCCAAT TCTCCTCCAC AGCTTGTCAC CAATAGCCTT
ATTGACATAA ATCTCGGAAT AAGGGAGTTC GTGGAGTCCT CTTTCTACAC GCCGTGGTAC
GAAAATGGAT CCTTCAATAG TGAAGTTCCG TCCTCAGTGA GCGGAATAGA GGAAGATCCA
ATCGGAAATA AGGTTAGTTA CTACCATCCA TGGAGAAAGT GGACTATGCC TAACCCGCAG
CCTAGACCGG TTCCAATGGC CTATCCTGCA CCCTATTCAT GGGCGGTTTC ACCTAGAATA
GTTCCGTACC AGAATCACAA ACCAATTACC AATCTCTTCT ACAACGTTGA AGCGGATCCC
ATGGCCGTGA TGTATGCTCA AGTTCTTCAG CCACAGGCCC CTACCCCCAT ATATACTTCC
AGCTATCCCT CAGGCTTTGA AGTCTCATAC AACAGCAACG AGATGAGTGC TACCTTCTAC
TTGCCCACTG TGAACAGTCC AAGGATATCA CTGCCTCCTG AATTTCAGCA GGGGAGCGAA
ATAGAGTTTA AGTATGTGGC ACCATACGCG CTTTCCGGTG GAAAGATAGT TACTAATGCC
ATAGAAAGGA TGAGGGCCAG GGCATTTGAG GCGGGTCTAG ATGGAATGGG AATGTGGATA
GCCTGGATGT CCGCTATCAC GTACTTGAAG AAGGGTATGA CGCAAGTGAG TAGTATGCCT
CCATCGAGCT GGACCTACAA GTCCAATACT AATACAGGGG TAGCATTAGG TGTGGGAATG
AAGGAGGCCC CACGAGGTGC ACAGTATCAT TCAGAGGTGT TCGCCACTGG AACTGGCGTA
AATGTCCCAG CAATTAACCC GCAACAAATG CAACCAACTA CAGTGAACTC TGGTCCAAGG
GTGAAGAATT CCTATGACGA CGGCATTCAA ACAATTAAAC CTGCATCTCC AACACACGGC
GCAGGAACTT TTGAGGAAGT GCTGATGGGG AACCCCGATT ATAATATGCC TGGTACTCCT
AGGTTAACAG TTATTCCTAC GGAGCAGTGG GATGGCTTCG AGTTTGCCCA AACCCTACGA
TCATTTGATC CATGTTTTGT ATGCGGAGTG CATATGGTAT TGCCAAATGG AAGGGCTAGA
TACATTACCC TTGGAGCTCC CGTTGATTTA AGTAATGCGA TTAAAGCATT CTACAGGTTT
GCCATGAAGG TGAAGTAG
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| Protein sequence | MASSSPYYFT FDWTKPVLIE PIVRIKPELG IQVTYDSSSN RVTDAYAAAG MFRGFEIFMR
NKPGPDVIML SSRECGICGE HHQFIERIAQ EMAQGGNAPP PLGLETIILA NDAAMTYDAT
AHLTALGGPD WSSLFFKVAG YFPSQIYEIA QQTPLSKVAQ ESQAFPMGAP TQLEMAGVKL
KTVSDLMDAL VPIIGAYFLE GAYSWRILHE AELLYYLRVP HPITMVPGGI GVPATVENLQ
RYFQRMVDGT AWLMKQMAVY EYLTLFLADY NNTFGIQALY DKLNGTLGFA EEGNRPGNFV
SYGQSDVSEA PSVTPSSTSV MPYDGTYENM GAWGRARVVK PGLVIQPNSN SPPQLVTNSL
IDINLGIREF VESSFYTPWY ENGSFNSEVP SSVSGIEEDP IGNKVSYYHP WRKWTMPNPQ
PRPVPMAYPA PYSWAVSPRI VPYQNHKPIT NLFYNVEADP MAVMYAQVLQ PQAPTPIYTS
SYPSGFEVSY NSNEMSATFY LPTVNSPRIS LPPEFQQGSE IEFKYVAPYA LSGGKIVTNA
IERMRARAFE AGLDGMGMWI AWMSAITYLK KGMTQVSSMP PSSWTYKSNT NTGVALGVGM
KEAPRGAQYH SEVFATGTGV NVPAINPQQM QPTTVNSGPR VKNSYDDGIQ TIKPASPTHG
AGTFEEVLMG NPDYNMPGTP RLTVIPTEQW DGFEFAQTLR SFDPCFVCGV HMVLPNGRAR
YITLGAPVDL SNAIKAFYRF AMKVK
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