Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0926 |
Symbol | |
ID | 5104356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 856577 |
End bp | 856933 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640506829 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001191022 |
Protein GI | 146303706 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTGTT GCCTCAAAGA TGACGGAGAT CTTTGCACCA CATATACACC CGCAGTATAC GATTTGATAA CCAAGAAATA TACGTTAAGT ATCTTAGTAC TTCTAGACAA ATATGGAAAA ATGAGATTTA GCGAAATACT AAGAAAGGTA GATGGATTGA CACAAAGGGC TCTATCCATA AGACTCAAGG AGCTAGAACA TAACGGTATT GTGCAGAGAG AGGTTGTCAA TAGTAGGCCT GTTGCCACTA TCTATTCTCT CACTGTCCAA GGAAGGGCAA TTAAGAATGC GATGTTAATT CTCTTGGAAC TCTCGAACTT GATTAGCCCT AATTCCCCGA AGGACTATTT CTGTTGA
|
Protein sequence | MDCCLKDDGD LCTTYTPAVY DLITKKYTLS ILVLLDKYGK MRFSEILRKV DGLTQRALSI RLKELEHNGI VQREVVNSRP VATIYSLTVQ GRAIKNAMLI LLELSNLISP NSPKDYFC
|
| |