Gene Msed_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0926 
Symbol 
ID5104356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp856577 
End bp856933 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content39% 
IMG OID640506829 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001191022 
Protein GI146303706 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGTT GCCTCAAAGA TGACGGAGAT CTTTGCACCA CATATACACC CGCAGTATAC 
GATTTGATAA CCAAGAAATA TACGTTAAGT ATCTTAGTAC TTCTAGACAA ATATGGAAAA
ATGAGATTTA GCGAAATACT AAGAAAGGTA GATGGATTGA CACAAAGGGC TCTATCCATA
AGACTCAAGG AGCTAGAACA TAACGGTATT GTGCAGAGAG AGGTTGTCAA TAGTAGGCCT
GTTGCCACTA TCTATTCTCT CACTGTCCAA GGAAGGGCAA TTAAGAATGC GATGTTAATT
CTCTTGGAAC TCTCGAACTT GATTAGCCCT AATTCCCCGA AGGACTATTT CTGTTGA
 
Protein sequence
MDCCLKDDGD LCTTYTPAVY DLITKKYTLS ILVLLDKYGK MRFSEILRKV DGLTQRALSI 
RLKELEHNGI VQREVVNSRP VATIYSLTVQ GRAIKNAMLI LLELSNLISP NSPKDYFC