| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0923 |
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| Symbol | |
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| ID | 5104353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 853272 |
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| End bp | 854813 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506826 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001191019 |
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| Protein GI | 146303703 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGAGA AAGTAATAAG TCCACTCAAT AGGGTAGAAG GGGACTTGGA CCTTAAGGTA
GTTTTTGAGG GAAAGAAAGT TGTAAAGGCC TTTCCCATGT CTAGGCTGTT CAGGGGAATA
GAGATAATCC TTAAGGGAAA ATTCCCCATG GATTCCTTGG TTATAACCCC GAGAATATGT
GGTATATGCG GGGGTTCACA TCTGCTTTCT GCGGCGAAGG CCCTAGAGAT GGCCTATGGG
GCGAGTGTTC CGCCCAACGC TGTGAGGTTG AGAAATGTGA TGACGTTAGC CGAAATGGGA
CAAAATGACG TCAGACATAC CTACCTCATG TTCCTTATAG ATACGGTCAA TCTGAAATAT
GAAAAGATGG GGTTTTACAG GGACATAGTG CTTAGATGGG CTCCATATCT AGGTCAGTCA
TACAAACAGG CAGTAGCCTG GTCTAAAAGA TACACCGAGA TCTATGCAAT ATTTGGTGGA
CAGTGGCCAC ATGGTTCAGC TATGGTTCCA GGAGGCGTTA CCACTGATCC GCTCAGCAAT
GACATAATAA AGGCCAAATC TATTCTCGCA TCTATTACTG CAGAGTTCCT GGAAAAAGTG
ATTCTGGGAG GTCCCCTAGA CCAGTTTCTC CAAGTGAAGA GCAAAAGGGA TCTGGACCAG
TGGGCCAAGG ACTATCCCAA TGGAGATATT TCCAAGATCT GGAACTACGG GCTAGAAATG
AAATGGGATA AGATAGGTAG TGGCTCACAG TACCTCATGA GTTACGGACA TGTGACGCTT
CCAGAACATT ATGACCCCGC ATCACACGTA GAAAAAAAGA GGTTTAGGGA GGGTTTACTG
GATCTTAGGA CTCGCGAGAT TCATCAAATT AAAGAGGAGA ACATAGTGGA GTTTGTTTCC
CACTCTTTTT ACTCCTATGA ACAGGGAGAT AAGGTTGGGC TTCATCCTTA TAATGGCGAA
ACAACGCCCC TACCACCGGA ATCCAAGGGA AAATACACTT TTACCAAGGC TTTTAGATAT
AAACTAGGTG GGAAGTACGT GGCTCCGGAA GTTGGAGCCT TAGCAATGAT GGTAGTAGCA
GGAGACCCAT TAATGACAGA TCTAGTTTAT AGGATTGGAA CCAGCGTTCT CGCTAGGGAA
ATAGCTAGAA TTGTTAGACT CGCCCGAATC CATGAGATCA TGAGAGAGGA GTTGGAAAGC
TACGAGTACG ATGAAATTAC GTACATAAAA CCTGAGGAAA AACTATCTGG AAGAGGTTAT
GGTCTGGTTG AGGCGTCCAG AGGTTCCCTA GGTCACTGGC TCGTGATAGA AGAGGGAAAA
ATTAAGAACT ACCAGGTCGT TACACCAACT CAGATTAACA TGGGGCCAGA AGATCCCTTC
GGTAACCCAA GCCATTTATC CATAGCACTT CAGGGAACAG AGGTGGAGAA TCCCAACAAT
CCCATAGAGG TAGCTCATAT TGTCAGGTCA CATGATGCAT GTATGGTATG CAACGTTCAT
GTCTTAGACG GCGGAAAAGA GATACTCTCG ATGAGACTAT GA
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| Protein sequence | MNEKVISPLN RVEGDLDLKV VFEGKKVVKA FPMSRLFRGI EIILKGKFPM DSLVITPRIC
GICGGSHLLS AAKALEMAYG ASVPPNAVRL RNVMTLAEMG QNDVRHTYLM FLIDTVNLKY
EKMGFYRDIV LRWAPYLGQS YKQAVAWSKR YTEIYAIFGG QWPHGSAMVP GGVTTDPLSN
DIIKAKSILA SITAEFLEKV ILGGPLDQFL QVKSKRDLDQ WAKDYPNGDI SKIWNYGLEM
KWDKIGSGSQ YLMSYGHVTL PEHYDPASHV EKKRFREGLL DLRTREIHQI KEENIVEFVS
HSFYSYEQGD KVGLHPYNGE TTPLPPESKG KYTFTKAFRY KLGGKYVAPE VGALAMMVVA
GDPLMTDLVY RIGTSVLARE IARIVRLARI HEIMREELES YEYDEITYIK PEEKLSGRGY
GLVEASRGSL GHWLVIEEGK IKNYQVVTPT QINMGPEDPF GNPSHLSIAL QGTEVENPNN
PIEVAHIVRS HDACMVCNVH VLDGGKEILS MRL
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