| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0892 |
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| Symbol | |
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| ID | 5103538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 827861 |
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| End bp | 828964 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506795 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001190988 |
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| Protein GI | 146303672 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATAA ACATAGGAGG AGGATTGCCT GATCCCAGAA CGTTCCCCTG GGAGCGTATG
GGTGAGATTG TAGATTACCT TATCAGAGAA AGGAGCGAAA CAACCCTGCA GTATGCCCCA
AGTGAAGGTA TAGAGGAGGT CAGGAAAGAG ATATCCAATT TTGTTAGGAA GAGAGGATTC
TCCTTGGAGG AGGATCAGAT ACTTATAACG GGAGGAGCTA AGGAGGCCAT ATACTTACTC
TCTGAACTTT TCTCGCAGAA CATGGTAGCC TCTGAGGAAC CCACGTTTCA GGGATTCATA
AGTACCATGA GTTACAGAGG GTTAAGGGCA TATCCAATCC CTTGGGATGA ATACGGTCCC
ATGACCGACG TCCTCGAGAA GAGGTTAAAG GCACTTCGAA TGTGGGCAGA CCCAGTGAAG
TACTTTTACG TAGTCCCAGT TCACAACCCG ACGGGGAGAG TCATGACCAA GGATAGGCGC
AAACACCTCC TTGAGTTGGC CAGTGACTTC AACTTTCAGA TCATTGAGGA TGACATATAT
GGGTTCTACA TGTATGACGA TCCTCCCTAT CCTGCACTTA AATCCCTTGA TAAGGAAGGA
AGAGTAATCT ACATCTCAAG TTTTAGTAAG ATCATTTCTC CAGGGCTCAG GGTAGGCTTC
ATAGGCTATG AGGGAAGGGA GATCGAAAAG TTAGCTACTA TCAAGAGCGA AATTAATCAT
CAAGTTTCTA CACTGGATCA ACTTATCGTG GGGGAAATGC TCAGGAGAGA CCTCGTGGAC
GCCGTAGTCG AGAACTCCGT ACTCCTTTAC AGGAAAAAGA GGAACGTCAT GCTCGACGCA
ATAGAGGAAT ATTTCCCGTC CAGCACTGGG TGCAGTTACA CAGAGGGAGG TTTCTTCACT
CTATGCAGAA AAGAGGCACT AGACTCGTCA TCCCTGCTCA AGGAGGCCTT GAAAAGGGAC
GTTAAGTTCA TTCCTGGAGA GAAGTTCTTC TACTCTAGCG AACAGGGAAG AAATTCCTTT
AGACTTAGTT TCAGTTTCGC TAAGGAGGAA GAAATAGTGG AAGGTGTGAG GATACTTGGT
GAGCTGTTGA AGGGAATTAA ATGA
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| Protein sequence | MPINIGGGLP DPRTFPWERM GEIVDYLIRE RSETTLQYAP SEGIEEVRKE ISNFVRKRGF
SLEEDQILIT GGAKEAIYLL SELFSQNMVA SEEPTFQGFI STMSYRGLRA YPIPWDEYGP
MTDVLEKRLK ALRMWADPVK YFYVVPVHNP TGRVMTKDRR KHLLELASDF NFQIIEDDIY
GFYMYDDPPY PALKSLDKEG RVIYISSFSK IISPGLRVGF IGYEGREIEK LATIKSEINH
QVSTLDQLIV GEMLRRDLVD AVVENSVLLY RKKRNVMLDA IEEYFPSSTG CSYTEGGFFT
LCRKEALDSS SLLKEALKRD VKFIPGEKFF YSSEQGRNSF RLSFSFAKEE EIVEGVRILG
ELLKGIK
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