| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0887 |
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| Symbol | ureC |
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| ID | 5103533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 820729 |
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| End bp | 822396 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506790 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001190983 |
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| Protein GI | 146303667 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAATTT CAAGGGAGAG ATACGCAGAA CTATACGGAC CAACAGAGGG GGATAAGATC
AGACTGGGTG ACACAAACCT AGTTATCACG GTCGAGAAGG ACATGATTAG AAAGGGTGAT
GAACTTGTGT TTGGTGCAGG CAAATCCGCC CGTGACGGAT TGGGTCTTCT TCCGACGGTG
AAGGAAGAGG AGTCCATGGA TCTCGTTATC ACAAATGTGG TGATAATGGA CCCTTTACTT
GGAATAGTTA AAGCCGACAT AGGAATAAAG GACGGAGTCA TCGTGGGGAT AGGTCATGGT
GGTAACCCAT TTACCATGGA TGGAGTTGAC TTCGTGCTGG GACCGTCGAC CGAGGTAATT
TCTGGAGAGG GGTTAATAGC CACTCCAGGT TTCATAGACA CTCACGTTCA CTGGGTTGCC
CCACAGCAGG TATACGATGC GATCTCCGCA GGCTTCACGA CCTTAATTGG CGGAGGTACC
GGTCCGGCCG AGGGGACCAA GGCAACCACG GTCACCCCAG GATCTTGGAA CTTGAGAGTG
ATATTTTCTG CCCTGGACCA GTATCCCGTA AACTTCGGTC TAACTGCGAA GGCGTCATCA
ACGTCAGTTA GCATGGAGCA AGTGCTGAAC CAGGGCGCGT GTGGATTCAA GATTCATGAG
GACTGGGGAG CCATGCCGAG GGTAATTGAT GAAACCTTAA CCTTGGCTGA CCAGAGGGAC
GTGCAGGTCA CTATTCACAC AGATACATCT AATGAGAGCG GATTCCTCGA GGACACCTTA
AGCGCGATTG GCGGTAGGAC TATTCACGCC TATCACGTGG AAGGTGCGGG AGGAGGTCAC
GCTCCAGACA TCATTAAAAT TGCAGGAGAA CCCAACATAC TTCCGTCCTC AACTAATCCC
ACTAAACCCT TCACAGTCCA CACATATGAG GAACACCTGG AGATGCTCAT GGCAGTTCAT
CACCTGAACC CAAAGGTACC TGAGGACGTG TCCTATGCGG AATCCAGAAT CAGGGCTGAA
ACCATGGCTG CCGAGGATTA CCTCCACGAT CTTGGGGCAA TAAGCATGAT GTCTTCGGAC
TCGCAAGCCA TGGGAAGGAT TGGGGAGACA GGAATTAGGA CATTCCAGCT TGCTCATAAG
ATGAAGGAAC TTAACCTGAT CCCCATGCCT GACAATCAAA GGGTCCTGAG ATATCTCGCA
AAAATAACCA TAAATCCTGC CATAACCCAC GGTATATCAG AGTACGTAGG ATCCCTGTCC
CCTGGAAAGC TGGCAGATAT TGTTCTGTGG GACCCTAGGT TTTTCCCCGC GAAGCCCTAC
ATGGTTATCA AGGGCGGAGC CATCTCATGG GCCCTAATGG GTGAAACCAA CGCCTCTATT
GCATATGCTC AGCCTGTGCT TTACAAACCC ATGTTCGGAT TTACAGCGCC GGTATCCCTG
CTATTTTCCT CACTGGATGG GGTAAACGAA GCGGGGAAAA ATGTCAAGAG GAGAGTGGTA
CCAGTAAGAA ATACTAGGAC CATCTCGAAA TCTCACATGA AACTTAACGA TGCTACGCCT
GAGATAGAGG TGGACCCTGA CAAATATGAG GTTAAGGTCG ATGGGGTAGT CCCGAAGATC
CCGCCTTCTA AGGAATTGCC TCTAACCAGA TTATACTTCC TGTTTTAG
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| Protein sequence | MKISRERYAE LYGPTEGDKI RLGDTNLVIT VEKDMIRKGD ELVFGAGKSA RDGLGLLPTV
KEEESMDLVI TNVVIMDPLL GIVKADIGIK DGVIVGIGHG GNPFTMDGVD FVLGPSTEVI
SGEGLIATPG FIDTHVHWVA PQQVYDAISA GFTTLIGGGT GPAEGTKATT VTPGSWNLRV
IFSALDQYPV NFGLTAKASS TSVSMEQVLN QGACGFKIHE DWGAMPRVID ETLTLADQRD
VQVTIHTDTS NESGFLEDTL SAIGGRTIHA YHVEGAGGGH APDIIKIAGE PNILPSSTNP
TKPFTVHTYE EHLEMLMAVH HLNPKVPEDV SYAESRIRAE TMAAEDYLHD LGAISMMSSD
SQAMGRIGET GIRTFQLAHK MKELNLIPMP DNQRVLRYLA KITINPAITH GISEYVGSLS
PGKLADIVLW DPRFFPAKPY MVIKGGAISW ALMGETNASI AYAQPVLYKP MFGFTAPVSL
LFSSLDGVNE AGKNVKRRVV PVRNTRTISK SHMKLNDATP EIEVDPDKYE VKVDGVVPKI
PPSKELPLTR LYFLF
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