| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0881 |
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| Symbol | |
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| ID | 5103527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 815221 |
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| End bp | 816474 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506784 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190977 |
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| Protein GI | 146303661 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.58272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAATA GGGGATTGGT TTCAGGTACC TTAGCCTTCT TTGCAGGCTT CGCAGCAGTT
GCCCTGTTTG GAACGACAGC CTTAAGGATA GGGCCACTCC TTCATCTTAA CCTGGTTGAA
GTGTCTTGGT TGGTTGCAAT TCCAACCTTA ACTGGTGCCT TCCTGAGAAT TCCCTTTTCG
CTTCTAGTAG ATAATTTAGG GCGCAAAACC ATCCTATTAC AGTTGCTCTT GGGATTGCTA
GGTCTCTTGG GTATCATCTT CACTCTAATG CATCTAAATT CTCTCTCCAG CCAACTTATC
TACTATCTAC TCCTGCTCTT TGGTGCCTTG GCGGGGACTG GAATCTCCAC ATTTTCGAGT
GGCGTCACAT ACGTTTCCTA TTTCTTTCCC CAGAAAGAGC AGGGAAAGGC CCTGGGCATT
TTTGCGGGAT TGGGTAACAC AGCCCCAGGC ATTTTCACTA CACTTCTTCC CTTTGCCCTA
TCATACCTAG GATTAGTATA TTCCTATGTG GCCTGGGCCC TTTTTCTTAG TATAATGATA
CTAATTTACA TATTGGTATC CATAGATCCT CCATTTCTTC ATTTCCTGAA GGAGGGGAAG
ACTAGGAAAG ACGCTGAGGC CTTATCTAAA TCCATGGGTT TGGACATCGT TCCGTCTCAT
TCCTTATCAA GATCCCTGGT TAAGGCGTTA AGGAGCCCTA GAATATGGGC TCTAGTCTTC
ATGTATTTGA CCTCATTCGG TGGATTTGAG GCCTTAACAG AATGGCTTCC CCTATATTGG
AAAAGCTTCC TTCACCTAAC TCCAGTGGAA GCTGGTATCC TTACTGGAAC TATTTACTCG
CTACTGACTG CTGTAGTAAG GATACCAGGA GGTTGGATTT CAGATAGGAT TAATGGAGAG
CTAGTGTCAA CTATAGCCTA CCTAACAATG ATAGTAGGAA GCTTGGTCTT CCTCTTCGCG
TTTTCCCTTT CCCTAGCAGT AGTTGCGGAA ATTATAATTG CTGTGGGAAT GGGAATGGCT
AACGGCGCAG TGTTTAAACT GGTTCCTAGG TACTCTCCCA CTGCAGTCAG CGGAGCTTCA
GGCCTCGTGG GCGGATTAGG TTCCGCTGGC GGTCTCCTCC TTCCACCCAT AATGGGTTAC
GTAGCTACGT TGCTGAACTT TCCTGCTTCA TTCCTAGTCT TTACTATCCT TGCAATCATC
TCCTTAGTTC TATCGGTCCT TCTACTTAGA GCGAGTGAGG CGATGAGGGC ATGA
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| Protein sequence | MRNRGLVSGT LAFFAGFAAV ALFGTTALRI GPLLHLNLVE VSWLVAIPTL TGAFLRIPFS
LLVDNLGRKT ILLQLLLGLL GLLGIIFTLM HLNSLSSQLI YYLLLLFGAL AGTGISTFSS
GVTYVSYFFP QKEQGKALGI FAGLGNTAPG IFTTLLPFAL SYLGLVYSYV AWALFLSIMI
LIYILVSIDP PFLHFLKEGK TRKDAEALSK SMGLDIVPSH SLSRSLVKAL RSPRIWALVF
MYLTSFGGFE ALTEWLPLYW KSFLHLTPVE AGILTGTIYS LLTAVVRIPG GWISDRINGE
LVSTIAYLTM IVGSLVFLFA FSLSLAVVAE IIIAVGMGMA NGAVFKLVPR YSPTAVSGAS
GLVGGLGSAG GLLLPPIMGY VATLLNFPAS FLVFTILAII SLVLSVLLLR ASEAMRA
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