| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0880 |
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| Symbol | |
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| ID | 5103526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 813894 |
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| End bp | 815231 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640506783 |
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| Product | nitrite and sulphite reductase 4Fe-4S region |
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| Protein accession | YP_001190976 |
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| Protein GI | 146303660 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.612323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATA GTGAGAAATT TAAATCACTC TACCCAGAAA GATTTAAGGG AATTTATTCA
AGCAGAGGAG ATAACGATCT TATCTCCATA AGGATAAGGC AAGGAAAAGA ACGGGATCCC
TCTAGATGGT GGTACCAGCA ACTAGAGGTC TTAGCCAATA TATCTAAGAA AGGAGATGGA
AGAGTTCATT TTACAACAAG GGGAGATGTA GAACTTTACG GAATTCAGCT ATCTGATAAG
GAGAAGGTGC TGAGAGAGCT TGAGAGTGTC GAGTTGGATC CAAGGGATTC CTGTGGGGCA
TCGGTTAGAA ACGTCCTTCC ATGTCCATCT TACATTTGCC CCTTTGCTAA GACAGATGCA
ATTAAGGCCT CCCTTGAGAT AGCTTCCTTC TTCAGACATA ATCCAGAGTA CGAATTTCCC
AAACTTCCAA AAAGGGTAAA GATCTCTGTC TCGGCATGTG AAAAGGGATG TTCGGTTCCC
GTAATAATGG ATGTGGGAAT TGTAGCCAGA GGTGAAGATC TCTTCGACGT GTGGGTGGGT
GGGGGAATTG GAGACCATGA TTTTCAGGGC ATCAAGCTAT TTGAGGGAGT TACGCTCGCT
GACGCCAAGA GGATCTCCAT AGCGGTTACC AACATCCTGA AGCGAGAGAA TGAGAAAAGG
GGATTCAAGT GGGTAGTGCA AAAATACGGT TCCGAAAGGG TTAAGGAAAT GATCCTGAAT
GAAATTGAAA AGATTCAGAT AGAGCGGATT AAGGGCATAC CATCCTCACA CCTCAACGCA
AAGTTAATGG TTGTTAGAAC TAGGGGTGGT TGGCTGAATT GGGAGGAAGT CGAAGAAGTT
GCCAAGATTG CAAGGGAGAA CTTAGGTTTT GTCTCGCTCT TTAATTCGCA GGCGATATTC
ATTCCTGTCA GGGAGTTACC TAAAGGTGCA GAGTCCGTTG AATATCCTTA CCTTAAAAAT
GTTGTCGAGG CATGCATTGG AGATGATTAT TGCCCTCCTG CAATAATTTC TACTACAAAA
ATGGCCGAGG ATCTGTTAAA AACTGCCTCA GACAGTAAAA TGCGTATTCA TATCTCCGGC
TGTTCCCACT CGTGTGGAAG GCATCAGGTT GCGGATTTAG GATTCAGAGC AGTTATGAGA
AACGGGAAAA GAGCTCTGAA AATATATGTA AATGGCAATA ATTATAGCAT AGGAAAAGTG
GTAGGTGAAG TCGACTACGA GGATTACCTT CTAGTTGTGG ACAAGTTAAA GGGGATAGAC
TTAGAAAATA TTGAAGAAAT AAGGAGAAAA TTAATGGAAA TTCCTTCCTT TAAAGCTGGT
GGTCAGAGTG AGGAATAG
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| Protein sequence | MKYSEKFKSL YPERFKGIYS SRGDNDLISI RIRQGKERDP SRWWYQQLEV LANISKKGDG
RVHFTTRGDV ELYGIQLSDK EKVLRELESV ELDPRDSCGA SVRNVLPCPS YICPFAKTDA
IKASLEIASF FRHNPEYEFP KLPKRVKISV SACEKGCSVP VIMDVGIVAR GEDLFDVWVG
GGIGDHDFQG IKLFEGVTLA DAKRISIAVT NILKRENEKR GFKWVVQKYG SERVKEMILN
EIEKIQIERI KGIPSSHLNA KLMVVRTRGG WLNWEEVEEV AKIARENLGF VSLFNSQAIF
IPVRELPKGA ESVEYPYLKN VVEACIGDDY CPPAIISTTK MAEDLLKTAS DSKMRIHISG
CSHSCGRHQV ADLGFRAVMR NGKRALKIYV NGNNYSIGKV VGEVDYEDYL LVVDKLKGID
LENIEEIRRK LMEIPSFKAG GQSEE
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